Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24338 | 73237;73238;73239 | chr2:178573120;178573119;178573118 | chr2:179437847;179437846;179437845 |
N2AB | 22697 | 68314;68315;68316 | chr2:178573120;178573119;178573118 | chr2:179437847;179437846;179437845 |
N2A | 21770 | 65533;65534;65535 | chr2:178573120;178573119;178573118 | chr2:179437847;179437846;179437845 |
N2B | 15273 | 46042;46043;46044 | chr2:178573120;178573119;178573118 | chr2:179437847;179437846;179437845 |
Novex-1 | 15398 | 46417;46418;46419 | chr2:178573120;178573119;178573118 | chr2:179437847;179437846;179437845 |
Novex-2 | 15465 | 46618;46619;46620 | chr2:178573120;178573119;178573118 | chr2:179437847;179437846;179437845 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.983 | N | 0.614 | 0.457 | 0.494433119893 | gnomAD-4.0.0 | 2.7376E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69889E-06 | 0 | 1.65717E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1242 | likely_benign | 0.1306 | benign | -0.708 | Destabilizing | 0.773 | D | 0.426 | neutral | N | 0.489312137 | None | None | N |
S/C | 0.1309 | likely_benign | 0.1491 | benign | -0.515 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
S/D | 0.3501 | ambiguous | 0.3572 | ambiguous | -0.584 | Destabilizing | 0.845 | D | 0.459 | neutral | None | None | None | None | N |
S/E | 0.5401 | ambiguous | 0.5608 | ambiguous | -0.656 | Destabilizing | 0.033 | N | 0.316 | neutral | None | None | None | None | N |
S/F | 0.2329 | likely_benign | 0.2581 | benign | -1.43 | Destabilizing | 0.996 | D | 0.656 | neutral | None | None | None | None | N |
S/G | 0.1176 | likely_benign | 0.1239 | benign | -0.804 | Destabilizing | 0.916 | D | 0.428 | neutral | None | None | None | None | N |
S/H | 0.2843 | likely_benign | 0.3082 | benign | -1.461 | Destabilizing | 0.997 | D | 0.579 | neutral | None | None | None | None | N |
S/I | 0.3564 | ambiguous | 0.3989 | ambiguous | -0.568 | Destabilizing | 0.987 | D | 0.661 | neutral | None | None | None | None | N |
S/K | 0.626 | likely_pathogenic | 0.6598 | pathogenic | -0.541 | Destabilizing | 0.845 | D | 0.48 | neutral | None | None | None | None | N |
S/L | 0.1471 | likely_benign | 0.1619 | benign | -0.568 | Destabilizing | 0.967 | D | 0.613 | neutral | N | 0.521913022 | None | None | N |
S/M | 0.2368 | likely_benign | 0.2657 | benign | -0.002 | Destabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | N |
S/N | 0.116 | likely_benign | 0.126 | benign | -0.419 | Destabilizing | 0.916 | D | 0.547 | neutral | None | None | None | None | N |
S/P | 0.8684 | likely_pathogenic | 0.8743 | pathogenic | -0.59 | Destabilizing | 0.983 | D | 0.614 | neutral | N | 0.510645622 | None | None | N |
S/Q | 0.4661 | ambiguous | 0.5042 | ambiguous | -0.81 | Destabilizing | 0.95 | D | 0.572 | neutral | None | None | None | None | N |
S/R | 0.6105 | likely_pathogenic | 0.6406 | pathogenic | -0.312 | Destabilizing | 0.975 | D | 0.613 | neutral | None | None | None | None | N |
S/T | 0.0757 | likely_benign | 0.0793 | benign | -0.482 | Destabilizing | 0.892 | D | 0.468 | neutral | N | 0.45831299 | None | None | N |
S/V | 0.3342 | likely_benign | 0.3704 | ambiguous | -0.59 | Destabilizing | 0.987 | D | 0.615 | neutral | None | None | None | None | N |
S/W | 0.456 | ambiguous | 0.4862 | ambiguous | -1.379 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
S/Y | 0.199 | likely_benign | 0.2143 | benign | -1.09 | Destabilizing | 0.996 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.