Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24340 | 73243;73244;73245 | chr2:178573114;178573113;178573112 | chr2:179437841;179437840;179437839 |
N2AB | 22699 | 68320;68321;68322 | chr2:178573114;178573113;178573112 | chr2:179437841;179437840;179437839 |
N2A | 21772 | 65539;65540;65541 | chr2:178573114;178573113;178573112 | chr2:179437841;179437840;179437839 |
N2B | 15275 | 46048;46049;46050 | chr2:178573114;178573113;178573112 | chr2:179437841;179437840;179437839 |
Novex-1 | 15400 | 46423;46424;46425 | chr2:178573114;178573113;178573112 | chr2:179437841;179437840;179437839 |
Novex-2 | 15467 | 46624;46625;46626 | chr2:178573114;178573113;178573112 | chr2:179437841;179437840;179437839 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.822 | N | 0.773 | 0.418 | 0.694220761729 | gnomAD-4.0.0 | 1.59224E-06 | None | None | None | None | N | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9137 | likely_pathogenic | 0.8982 | pathogenic | -2.79 | Highly Destabilizing | 0.019 | N | 0.499 | neutral | None | None | None | None | N |
I/C | 0.9342 | likely_pathogenic | 0.9274 | pathogenic | -3.025 | Highly Destabilizing | 0.994 | D | 0.778 | deleterious | None | None | None | None | N |
I/D | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -2.631 | Highly Destabilizing | 0.978 | D | 0.838 | deleterious | None | None | None | None | N |
I/E | 0.9979 | likely_pathogenic | 0.9981 | pathogenic | -2.418 | Highly Destabilizing | 0.956 | D | 0.823 | deleterious | None | None | None | None | N |
I/F | 0.6558 | likely_pathogenic | 0.673 | pathogenic | -1.899 | Destabilizing | 0.97 | D | 0.733 | prob.delet. | N | 0.486221037 | None | None | N |
I/G | 0.9945 | likely_pathogenic | 0.9936 | pathogenic | -3.306 | Highly Destabilizing | 0.915 | D | 0.777 | deleterious | None | None | None | None | N |
I/H | 0.9952 | likely_pathogenic | 0.9948 | pathogenic | -2.565 | Highly Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
I/K | 0.9947 | likely_pathogenic | 0.9956 | pathogenic | -2.176 | Highly Destabilizing | 0.956 | D | 0.825 | deleterious | None | None | None | None | N |
I/L | 0.2537 | likely_benign | 0.2803 | benign | -1.297 | Destabilizing | 0.294 | N | 0.449 | neutral | N | 0.493905644 | None | None | N |
I/M | 0.3227 | likely_benign | 0.3693 | ambiguous | -1.719 | Destabilizing | 0.97 | D | 0.684 | prob.neutral | N | 0.521060534 | None | None | N |
I/N | 0.9895 | likely_pathogenic | 0.9879 | pathogenic | -2.504 | Highly Destabilizing | 0.97 | D | 0.827 | deleterious | N | 0.511886616 | None | None | N |
I/P | 0.9984 | likely_pathogenic | 0.9982 | pathogenic | -1.777 | Destabilizing | 0.978 | D | 0.837 | deleterious | None | None | None | None | N |
I/Q | 0.9938 | likely_pathogenic | 0.9942 | pathogenic | -2.406 | Highly Destabilizing | 0.978 | D | 0.829 | deleterious | None | None | None | None | N |
I/R | 0.9897 | likely_pathogenic | 0.9907 | pathogenic | -1.857 | Destabilizing | 0.978 | D | 0.829 | deleterious | None | None | None | None | N |
I/S | 0.9745 | likely_pathogenic | 0.9685 | pathogenic | -3.364 | Highly Destabilizing | 0.698 | D | 0.759 | deleterious | N | 0.496237897 | None | None | N |
I/T | 0.9523 | likely_pathogenic | 0.9504 | pathogenic | -2.99 | Highly Destabilizing | 0.822 | D | 0.773 | deleterious | N | 0.511126148 | None | None | N |
I/V | 0.0905 | likely_benign | 0.0924 | benign | -1.777 | Destabilizing | 0.006 | N | 0.182 | neutral | N | 0.405270726 | None | None | N |
I/W | 0.9945 | likely_pathogenic | 0.9947 | pathogenic | -2.018 | Highly Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
I/Y | 0.9717 | likely_pathogenic | 0.9712 | pathogenic | -1.827 | Destabilizing | 0.993 | D | 0.796 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.