Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24362 | 73309;73310;73311 | chr2:178573048;178573047;178573046 | chr2:179437775;179437774;179437773 |
N2AB | 22721 | 68386;68387;68388 | chr2:178573048;178573047;178573046 | chr2:179437775;179437774;179437773 |
N2A | 21794 | 65605;65606;65607 | chr2:178573048;178573047;178573046 | chr2:179437775;179437774;179437773 |
N2B | 15297 | 46114;46115;46116 | chr2:178573048;178573047;178573046 | chr2:179437775;179437774;179437773 |
Novex-1 | 15422 | 46489;46490;46491 | chr2:178573048;178573047;178573046 | chr2:179437775;179437774;179437773 |
Novex-2 | 15489 | 46690;46691;46692 | chr2:178573048;178573047;178573046 | chr2:179437775;179437774;179437773 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1708819361 | None | 0.004 | N | 0.466 | 0.232 | 0.498896430806 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1708819361 | None | 0.004 | N | 0.466 | 0.232 | 0.498896430806 | gnomAD-4.0.0 | 3.0452E-06 | None | None | None | None | N | None | 1.74825E-05 | 0 | None | 0 | 0 | None | 0 | 5.16529E-04 | 1.20498E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2759 | likely_benign | 0.2452 | benign | -2.323 | Highly Destabilizing | 0.373 | N | 0.645 | neutral | None | None | None | None | N |
I/C | 0.6679 | likely_pathogenic | 0.6588 | pathogenic | -1.435 | Destabilizing | 0.009 | N | 0.575 | neutral | None | None | None | None | N |
I/D | 0.9208 | likely_pathogenic | 0.8983 | pathogenic | -2.845 | Highly Destabilizing | 0.854 | D | 0.789 | deleterious | None | None | None | None | N |
I/E | 0.7731 | likely_pathogenic | 0.7435 | pathogenic | -2.545 | Highly Destabilizing | 0.854 | D | 0.788 | deleterious | None | None | None | None | N |
I/F | 0.1894 | likely_benign | 0.1807 | benign | -1.339 | Destabilizing | 0.939 | D | 0.759 | deleterious | N | 0.469783565 | None | None | N |
I/G | 0.7946 | likely_pathogenic | 0.748 | pathogenic | -2.924 | Highly Destabilizing | 0.854 | D | 0.751 | deleterious | None | None | None | None | N |
I/H | 0.6303 | likely_pathogenic | 0.6125 | pathogenic | -2.571 | Highly Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | N |
I/K | 0.3082 | likely_benign | 0.3156 | benign | -1.71 | Destabilizing | 0.742 | D | 0.781 | deleterious | None | None | None | None | N |
I/L | 0.1222 | likely_benign | 0.1165 | benign | -0.547 | Destabilizing | 0.164 | N | 0.393 | neutral | N | 0.467665979 | None | None | N |
I/M | 0.0692 | likely_benign | 0.0696 | benign | -0.568 | Destabilizing | 0.979 | D | 0.737 | prob.delet. | N | 0.421531045 | None | None | N |
I/N | 0.5942 | likely_pathogenic | 0.5282 | ambiguous | -2.301 | Highly Destabilizing | 0.939 | D | 0.793 | deleterious | N | 0.518134872 | None | None | N |
I/P | 0.9778 | likely_pathogenic | 0.9701 | pathogenic | -1.124 | Destabilizing | 0.984 | D | 0.795 | deleterious | None | None | None | None | N |
I/Q | 0.5521 | ambiguous | 0.5363 | ambiguous | -2.004 | Highly Destabilizing | 0.984 | D | 0.784 | deleterious | None | None | None | None | N |
I/R | 0.2917 | likely_benign | 0.2811 | benign | -1.717 | Destabilizing | 0.953 | D | 0.791 | deleterious | None | None | None | None | N |
I/S | 0.4166 | ambiguous | 0.3643 | ambiguous | -2.931 | Highly Destabilizing | 0.309 | N | 0.707 | prob.neutral | N | 0.482059429 | None | None | N |
I/T | 0.1332 | likely_benign | 0.1217 | benign | -2.467 | Highly Destabilizing | 0.004 | N | 0.466 | neutral | N | 0.452256597 | None | None | N |
I/V | 0.0805 | likely_benign | 0.0816 | benign | -1.124 | Destabilizing | 0.281 | N | 0.376 | neutral | N | 0.431937253 | None | None | N |
I/W | 0.7718 | likely_pathogenic | 0.7581 | pathogenic | -1.797 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
I/Y | 0.5087 | ambiguous | 0.4721 | ambiguous | -1.453 | Destabilizing | 0.984 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.