Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24366 | 73321;73322;73323 | chr2:178573036;178573035;178573034 | chr2:179437763;179437762;179437761 |
N2AB | 22725 | 68398;68399;68400 | chr2:178573036;178573035;178573034 | chr2:179437763;179437762;179437761 |
N2A | 21798 | 65617;65618;65619 | chr2:178573036;178573035;178573034 | chr2:179437763;179437762;179437761 |
N2B | 15301 | 46126;46127;46128 | chr2:178573036;178573035;178573034 | chr2:179437763;179437762;179437761 |
Novex-1 | 15426 | 46501;46502;46503 | chr2:178573036;178573035;178573034 | chr2:179437763;179437762;179437761 |
Novex-2 | 15493 | 46702;46703;46704 | chr2:178573036;178573035;178573034 | chr2:179437763;179437762;179437761 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1708815210 | None | 0.505 | N | 0.427 | 0.226 | 0.241078983079 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1708815210 | None | 0.505 | N | 0.427 | 0.226 | 0.241078983079 | gnomAD-4.0.0 | 6.57523E-06 | None | None | None | None | N | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | rs1708814132 | None | 0.879 | N | 0.435 | 0.317 | 0.425148423609 | gnomAD-4.0.0 | 1.59269E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8602E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.116 | likely_benign | 0.1166 | benign | -0.048 | Destabilizing | 0.505 | D | 0.439 | neutral | N | 0.468842202 | None | None | N |
E/C | 0.6637 | likely_pathogenic | 0.6759 | pathogenic | -0.257 | Destabilizing | 0.991 | D | 0.549 | neutral | None | None | None | None | N |
E/D | 0.0828 | likely_benign | 0.0875 | benign | -0.285 | Destabilizing | 0.001 | N | 0.257 | neutral | N | 0.404732009 | None | None | N |
E/F | 0.6248 | likely_pathogenic | 0.6213 | pathogenic | -0.074 | Destabilizing | 0.967 | D | 0.489 | neutral | None | None | None | None | N |
E/G | 0.0887 | likely_benign | 0.0848 | benign | -0.17 | Destabilizing | 0.338 | N | 0.445 | neutral | N | 0.402345064 | None | None | N |
E/H | 0.273 | likely_benign | 0.2816 | benign | 0.554 | Stabilizing | 0.906 | D | 0.446 | neutral | None | None | None | None | N |
E/I | 0.3002 | likely_benign | 0.3102 | benign | 0.217 | Stabilizing | 0.906 | D | 0.493 | neutral | None | None | None | None | N |
E/K | 0.094 | likely_benign | 0.0914 | benign | 0.343 | Stabilizing | 0.505 | D | 0.427 | neutral | N | 0.466705974 | None | None | N |
E/L | 0.2773 | likely_benign | 0.2763 | benign | 0.217 | Stabilizing | 0.826 | D | 0.457 | neutral | None | None | None | None | N |
E/M | 0.3264 | likely_benign | 0.3314 | benign | -0.045 | Destabilizing | 0.991 | D | 0.492 | neutral | None | None | None | None | N |
E/N | 0.1414 | likely_benign | 0.1484 | benign | 0.119 | Stabilizing | 0.01 | N | 0.331 | neutral | None | None | None | None | N |
E/P | 0.4144 | ambiguous | 0.4243 | ambiguous | 0.147 | Stabilizing | 0.01 | N | 0.369 | neutral | None | None | None | None | N |
E/Q | 0.1059 | likely_benign | 0.1071 | benign | 0.13 | Stabilizing | 0.782 | D | 0.407 | neutral | N | 0.494545936 | None | None | N |
E/R | 0.1675 | likely_benign | 0.1619 | benign | 0.62 | Stabilizing | 0.826 | D | 0.419 | neutral | None | None | None | None | N |
E/S | 0.1157 | likely_benign | 0.1211 | benign | -0.039 | Destabilizing | 0.404 | N | 0.427 | neutral | None | None | None | None | N |
E/T | 0.1371 | likely_benign | 0.1456 | benign | 0.067 | Stabilizing | 0.575 | D | 0.431 | neutral | None | None | None | None | N |
E/V | 0.1845 | likely_benign | 0.1869 | benign | 0.147 | Stabilizing | 0.879 | D | 0.435 | neutral | N | 0.484369015 | None | None | N |
E/W | 0.7568 | likely_pathogenic | 0.7512 | pathogenic | -0.023 | Destabilizing | 0.991 | D | 0.577 | neutral | None | None | None | None | N |
E/Y | 0.4708 | ambiguous | 0.4713 | ambiguous | 0.149 | Stabilizing | 0.967 | D | 0.486 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.