Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2437 | 7534;7535;7536 | chr2:178773859;178773858;178773857 | chr2:179638586;179638585;179638584 |
N2AB | 2437 | 7534;7535;7536 | chr2:178773859;178773858;178773857 | chr2:179638586;179638585;179638584 |
N2A | 2437 | 7534;7535;7536 | chr2:178773859;178773858;178773857 | chr2:179638586;179638585;179638584 |
N2B | 2391 | 7396;7397;7398 | chr2:178773859;178773858;178773857 | chr2:179638586;179638585;179638584 |
Novex-1 | 2391 | 7396;7397;7398 | chr2:178773859;178773858;178773857 | chr2:179638586;179638585;179638584 |
Novex-2 | 2391 | 7396;7397;7398 | chr2:178773859;178773858;178773857 | chr2:179638586;179638585;179638584 |
Novex-3 | 2437 | 7534;7535;7536 | chr2:178773859;178773858;178773857 | chr2:179638586;179638585;179638584 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | None | N | 0.227 | 0.067 | 0.162503812791 | gnomAD-4.0.0 | 1.59061E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85665E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0801 | likely_benign | 0.0823 | benign | -0.51 | Destabilizing | None | N | 0.213 | neutral | None | None | None | None | N |
S/C | 0.1008 | likely_benign | 0.1117 | benign | -0.159 | Destabilizing | 0.422 | N | 0.498 | neutral | D | 0.640232911 | None | None | N |
S/D | 0.3009 | likely_benign | 0.3123 | benign | 0.105 | Stabilizing | 0.018 | N | 0.377 | neutral | None | None | None | None | N |
S/E | 0.393 | ambiguous | 0.4061 | ambiguous | -0.003 | Destabilizing | 0.018 | N | 0.383 | neutral | None | None | None | None | N |
S/F | 0.1765 | likely_benign | 0.1905 | benign | -1.273 | Destabilizing | 0.112 | N | 0.5 | neutral | None | None | None | None | N |
S/G | 0.1 | likely_benign | 0.1067 | benign | -0.563 | Destabilizing | 0.006 | N | 0.381 | neutral | D | 0.597156617 | None | None | N |
S/H | 0.2067 | likely_benign | 0.2048 | benign | -1.206 | Destabilizing | None | N | 0.258 | neutral | None | None | None | None | N |
S/I | 0.1462 | likely_benign | 0.1569 | benign | -0.49 | Destabilizing | None | N | 0.325 | neutral | D | 0.638771867 | None | None | N |
S/K | 0.4233 | ambiguous | 0.4123 | ambiguous | -0.252 | Destabilizing | 0.018 | N | 0.377 | neutral | None | None | None | None | N |
S/L | 0.1153 | likely_benign | 0.1222 | benign | -0.49 | Destabilizing | 0.007 | N | 0.376 | neutral | None | None | None | None | N |
S/M | 0.1635 | likely_benign | 0.1767 | benign | -0.009 | Destabilizing | 0.112 | N | 0.515 | neutral | None | None | None | None | N |
S/N | 0.099 | likely_benign | 0.1023 | benign | 0.054 | Stabilizing | None | N | 0.226 | neutral | D | 0.551084444 | None | None | N |
S/P | 0.6938 | likely_pathogenic | 0.6931 | pathogenic | -0.474 | Destabilizing | 0.204 | N | 0.541 | neutral | None | None | None | None | N |
S/Q | 0.3326 | likely_benign | 0.3312 | benign | -0.283 | Destabilizing | 0.112 | N | 0.501 | neutral | None | None | None | None | N |
S/R | 0.3456 | ambiguous | 0.3432 | ambiguous | -0.094 | Destabilizing | 0.026 | N | 0.507 | neutral | D | 0.636692889 | None | None | N |
S/T | 0.0624 | likely_benign | 0.0661 | benign | -0.088 | Destabilizing | None | N | 0.227 | neutral | N | 0.506723871 | None | None | N |
S/V | 0.1426 | likely_benign | 0.1544 | benign | -0.474 | Destabilizing | 0.007 | N | 0.376 | neutral | None | None | None | None | N |
S/W | 0.3556 | ambiguous | 0.3787 | ambiguous | -1.248 | Destabilizing | 0.747 | D | 0.513 | neutral | None | None | None | None | N |
S/Y | 0.1648 | likely_benign | 0.1729 | benign | -0.964 | Destabilizing | 0.06 | N | 0.488 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.