Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24377 | 73354;73355;73356 | chr2:178573003;178573002;178573001 | chr2:179437730;179437729;179437728 |
N2AB | 22736 | 68431;68432;68433 | chr2:178573003;178573002;178573001 | chr2:179437730;179437729;179437728 |
N2A | 21809 | 65650;65651;65652 | chr2:178573003;178573002;178573001 | chr2:179437730;179437729;179437728 |
N2B | 15312 | 46159;46160;46161 | chr2:178573003;178573002;178573001 | chr2:179437730;179437729;179437728 |
Novex-1 | 15437 | 46534;46535;46536 | chr2:178573003;178573002;178573001 | chr2:179437730;179437729;179437728 |
Novex-2 | 15504 | 46735;46736;46737 | chr2:178573003;178573002;178573001 | chr2:179437730;179437729;179437728 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.001 | N | 0.124 | 0.128 | 0.0611884634855 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2651 | likely_benign | 0.2717 | benign | -0.769 | Destabilizing | 0.676 | D | 0.265 | neutral | None | None | None | None | I |
A/D | 0.1497 | likely_benign | 0.1518 | benign | -0.496 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | I |
A/E | 0.1372 | likely_benign | 0.143 | benign | -0.651 | Destabilizing | 0.012 | N | 0.26 | neutral | N | 0.455411545 | None | None | I |
A/F | 0.2056 | likely_benign | 0.2245 | benign | -0.855 | Destabilizing | 0.356 | N | 0.373 | neutral | None | None | None | None | I |
A/G | 0.099 | likely_benign | 0.1004 | benign | -0.197 | Destabilizing | 0.012 | N | 0.189 | neutral | N | 0.46039329 | None | None | I |
A/H | 0.2431 | likely_benign | 0.2527 | benign | -0.209 | Destabilizing | 0.356 | N | 0.334 | neutral | None | None | None | None | I |
A/I | 0.1327 | likely_benign | 0.1352 | benign | -0.325 | Destabilizing | 0.038 | N | 0.358 | neutral | None | None | None | None | I |
A/K | 0.2129 | likely_benign | 0.2123 | benign | -0.551 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | I |
A/L | 0.1079 | likely_benign | 0.1098 | benign | -0.325 | Destabilizing | 0.016 | N | 0.259 | neutral | None | None | None | None | I |
A/M | 0.1319 | likely_benign | 0.1315 | benign | -0.464 | Destabilizing | 0.356 | N | 0.274 | neutral | None | None | None | None | I |
A/N | 0.1271 | likely_benign | 0.1295 | benign | -0.228 | Destabilizing | 0.001 | N | 0.198 | neutral | None | None | None | None | I |
A/P | 0.1396 | likely_benign | 0.1286 | benign | -0.248 | Destabilizing | 0.055 | N | 0.367 | neutral | N | 0.475613459 | None | None | I |
A/Q | 0.18 | likely_benign | 0.182 | benign | -0.504 | Destabilizing | 0.214 | N | 0.354 | neutral | None | None | None | None | I |
A/R | 0.2319 | likely_benign | 0.2272 | benign | -0.099 | Destabilizing | 0.038 | N | 0.351 | neutral | None | None | None | None | I |
A/S | 0.0763 | likely_benign | 0.0786 | benign | -0.406 | Destabilizing | None | N | 0.141 | neutral | N | 0.495546014 | None | None | I |
A/T | 0.0671 | likely_benign | 0.0674 | benign | -0.487 | Destabilizing | 0.001 | N | 0.124 | neutral | N | 0.406601665 | None | None | I |
A/V | 0.0844 | likely_benign | 0.083 | benign | -0.248 | Destabilizing | None | N | 0.167 | neutral | N | 0.480040631 | None | None | I |
A/W | 0.498 | ambiguous | 0.5071 | ambiguous | -0.976 | Destabilizing | 0.864 | D | 0.413 | neutral | None | None | None | None | I |
A/Y | 0.2593 | likely_benign | 0.2805 | benign | -0.64 | Destabilizing | 0.356 | N | 0.362 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.