Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24379 | 73360;73361;73362 | chr2:178572997;178572996;178572995 | chr2:179437724;179437723;179437722 |
N2AB | 22738 | 68437;68438;68439 | chr2:178572997;178572996;178572995 | chr2:179437724;179437723;179437722 |
N2A | 21811 | 65656;65657;65658 | chr2:178572997;178572996;178572995 | chr2:179437724;179437723;179437722 |
N2B | 15314 | 46165;46166;46167 | chr2:178572997;178572996;178572995 | chr2:179437724;179437723;179437722 |
Novex-1 | 15439 | 46540;46541;46542 | chr2:178572997;178572996;178572995 | chr2:179437724;179437723;179437722 |
Novex-2 | 15506 | 46741;46742;46743 | chr2:178572997;178572996;178572995 | chr2:179437724;179437723;179437722 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.989 | N | 0.638 | 0.342 | 0.745142704899 | gnomAD-4.0.0 | 1.59273E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86022E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.639 | likely_pathogenic | 0.6459 | pathogenic | -2.053 | Highly Destabilizing | 0.842 | D | 0.567 | neutral | None | None | None | None | N |
L/C | 0.6004 | likely_pathogenic | 0.5849 | pathogenic | -1.321 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
L/D | 0.9523 | likely_pathogenic | 0.9486 | pathogenic | -1.499 | Destabilizing | 0.991 | D | 0.669 | neutral | None | None | None | None | N |
L/E | 0.7263 | likely_pathogenic | 0.7312 | pathogenic | -1.278 | Destabilizing | 0.991 | D | 0.661 | neutral | None | None | None | None | N |
L/F | 0.2703 | likely_benign | 0.2467 | benign | -1.055 | Destabilizing | 0.934 | D | 0.653 | neutral | N | 0.463200532 | None | None | N |
L/G | 0.8595 | likely_pathogenic | 0.8468 | pathogenic | -2.597 | Highly Destabilizing | 0.974 | D | 0.657 | neutral | None | None | None | None | N |
L/H | 0.5716 | likely_pathogenic | 0.5735 | pathogenic | -1.903 | Destabilizing | 0.997 | D | 0.643 | neutral | N | 0.466163047 | None | None | N |
L/I | 0.0914 | likely_benign | 0.0937 | benign | -0.504 | Destabilizing | 0.012 | N | 0.44 | neutral | N | 0.423616053 | None | None | N |
L/K | 0.5704 | likely_pathogenic | 0.5941 | pathogenic | -1.287 | Destabilizing | 0.974 | D | 0.637 | neutral | None | None | None | None | N |
L/M | 0.156 | likely_benign | 0.1561 | benign | -0.536 | Destabilizing | 0.949 | D | 0.661 | neutral | None | None | None | None | N |
L/N | 0.765 | likely_pathogenic | 0.7566 | pathogenic | -1.519 | Destabilizing | 0.991 | D | 0.659 | neutral | None | None | None | None | N |
L/P | 0.8839 | likely_pathogenic | 0.8615 | pathogenic | -0.997 | Destabilizing | 0.989 | D | 0.663 | neutral | N | 0.499671249 | None | None | N |
L/Q | 0.3872 | ambiguous | 0.406 | ambiguous | -1.351 | Destabilizing | 0.991 | D | 0.627 | neutral | None | None | None | None | N |
L/R | 0.5117 | ambiguous | 0.5382 | ambiguous | -1.155 | Destabilizing | 0.989 | D | 0.638 | neutral | N | 0.455945604 | None | None | N |
L/S | 0.7348 | likely_pathogenic | 0.7351 | pathogenic | -2.347 | Highly Destabilizing | 0.974 | D | 0.642 | neutral | None | None | None | None | N |
L/T | 0.5566 | ambiguous | 0.5584 | ambiguous | -1.964 | Destabilizing | 0.842 | D | 0.611 | neutral | None | None | None | None | N |
L/V | 0.1097 | likely_benign | 0.1153 | benign | -0.997 | Destabilizing | 0.051 | N | 0.309 | neutral | N | 0.407761166 | None | None | N |
L/W | 0.5124 | ambiguous | 0.4179 | ambiguous | -1.306 | Destabilizing | 0.016 | N | 0.476 | neutral | None | None | None | None | N |
L/Y | 0.6238 | likely_pathogenic | 0.5879 | pathogenic | -1.003 | Destabilizing | 0.949 | D | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.