Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24380 | 73363;73364;73365 | chr2:178572994;178572993;178572992 | chr2:179437721;179437720;179437719 |
N2AB | 22739 | 68440;68441;68442 | chr2:178572994;178572993;178572992 | chr2:179437721;179437720;179437719 |
N2A | 21812 | 65659;65660;65661 | chr2:178572994;178572993;178572992 | chr2:179437721;179437720;179437719 |
N2B | 15315 | 46168;46169;46170 | chr2:178572994;178572993;178572992 | chr2:179437721;179437720;179437719 |
Novex-1 | 15440 | 46543;46544;46545 | chr2:178572994;178572993;178572992 | chr2:179437721;179437720;179437719 |
Novex-2 | 15507 | 46744;46745;46746 | chr2:178572994;178572993;178572992 | chr2:179437721;179437720;179437719 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | 0.407 | 0.801 | N | 0.467 | 0.15 | 0.18274738541 | gnomAD-4.0.0 | 2.73793E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.63897E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2718 | likely_benign | 0.3251 | benign | 0.015 | Stabilizing | 0.688 | D | 0.436 | neutral | None | None | None | None | N |
K/C | 0.614 | likely_pathogenic | 0.6627 | pathogenic | -0.406 | Destabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | N |
K/D | 0.5815 | likely_pathogenic | 0.6326 | pathogenic | 0.112 | Stabilizing | 0.915 | D | 0.535 | neutral | None | None | None | None | N |
K/E | 0.1929 | likely_benign | 0.2274 | benign | 0.112 | Stabilizing | 0.801 | D | 0.467 | neutral | N | 0.448935785 | None | None | N |
K/F | 0.6964 | likely_pathogenic | 0.729 | pathogenic | -0.291 | Destabilizing | 0.949 | D | 0.545 | neutral | None | None | None | None | N |
K/G | 0.4007 | ambiguous | 0.462 | ambiguous | -0.137 | Destabilizing | 0.915 | D | 0.533 | neutral | None | None | None | None | N |
K/H | 0.2583 | likely_benign | 0.2945 | benign | -0.291 | Destabilizing | 0.974 | D | 0.537 | neutral | None | None | None | None | N |
K/I | 0.3086 | likely_benign | 0.3402 | ambiguous | 0.329 | Stabilizing | 0.728 | D | 0.538 | neutral | None | None | None | None | N |
K/L | 0.2645 | likely_benign | 0.295 | benign | 0.329 | Stabilizing | 0.016 | N | 0.347 | neutral | None | None | None | None | N |
K/M | 0.2065 | likely_benign | 0.2353 | benign | 0.015 | Stabilizing | 0.934 | D | 0.542 | neutral | N | 0.514795418 | None | None | N |
K/N | 0.4062 | ambiguous | 0.4523 | ambiguous | 0.105 | Stabilizing | 0.801 | D | 0.523 | neutral | N | 0.405953012 | None | None | N |
K/P | 0.4015 | ambiguous | 0.4748 | ambiguous | 0.25 | Stabilizing | 0.991 | D | 0.556 | neutral | None | None | None | None | N |
K/Q | 0.1215 | likely_benign | 0.138 | benign | -0.019 | Destabilizing | 0.934 | D | 0.541 | neutral | N | 0.411302903 | None | None | N |
K/R | 0.0761 | likely_benign | 0.0799 | benign | -0.026 | Destabilizing | 0.012 | N | 0.249 | neutral | N | 0.415343286 | None | None | N |
K/S | 0.373 | ambiguous | 0.4295 | ambiguous | -0.353 | Destabilizing | 0.728 | D | 0.46 | neutral | None | None | None | None | N |
K/T | 0.145 | likely_benign | 0.1754 | benign | -0.215 | Destabilizing | 0.022 | N | 0.246 | neutral | N | 0.416668651 | None | None | N |
K/V | 0.2694 | likely_benign | 0.3019 | benign | 0.25 | Stabilizing | 0.728 | D | 0.503 | neutral | None | None | None | None | N |
K/W | 0.6999 | likely_pathogenic | 0.745 | pathogenic | -0.356 | Destabilizing | 0.998 | D | 0.521 | neutral | None | None | None | None | N |
K/Y | 0.582 | likely_pathogenic | 0.6274 | pathogenic | 0.012 | Stabilizing | 0.991 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.