Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24392 | 73399;73400;73401 | chr2:178572958;178572957;178572956 | chr2:179437685;179437684;179437683 |
N2AB | 22751 | 68476;68477;68478 | chr2:178572958;178572957;178572956 | chr2:179437685;179437684;179437683 |
N2A | 21824 | 65695;65696;65697 | chr2:178572958;178572957;178572956 | chr2:179437685;179437684;179437683 |
N2B | 15327 | 46204;46205;46206 | chr2:178572958;178572957;178572956 | chr2:179437685;179437684;179437683 |
Novex-1 | 15452 | 46579;46580;46581 | chr2:178572958;178572957;178572956 | chr2:179437685;179437684;179437683 |
Novex-2 | 15519 | 46780;46781;46782 | chr2:178572958;178572957;178572956 | chr2:179437685;179437684;179437683 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.822 | D | 0.467 | 0.305 | 0.199424873507 | gnomAD-4.0.0 | 2.05335E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69888E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3198 | likely_benign | 0.3334 | benign | -0.505 | Destabilizing | 0.754 | D | 0.575 | neutral | None | None | None | None | N |
N/C | 0.3338 | likely_benign | 0.357 | ambiguous | 0.281 | Stabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
N/D | 0.1511 | likely_benign | 0.148 | benign | -0.421 | Destabilizing | 0.822 | D | 0.48 | neutral | N | 0.488195967 | None | None | N |
N/E | 0.3472 | ambiguous | 0.3461 | ambiguous | -0.415 | Destabilizing | 0.86 | D | 0.491 | neutral | None | None | None | None | N |
N/F | 0.5718 | likely_pathogenic | 0.5735 | pathogenic | -0.572 | Destabilizing | 0.978 | D | 0.685 | prob.neutral | None | None | None | None | N |
N/G | 0.2215 | likely_benign | 0.2374 | benign | -0.755 | Destabilizing | 0.019 | N | 0.262 | neutral | None | None | None | None | N |
N/H | 0.104 | likely_benign | 0.1121 | benign | -0.744 | Destabilizing | 0.032 | N | 0.317 | neutral | N | 0.507301803 | None | None | N |
N/I | 0.4244 | ambiguous | 0.4363 | ambiguous | 0.089 | Stabilizing | 0.97 | D | 0.688 | prob.neutral | N | 0.520454537 | None | None | N |
N/K | 0.2004 | likely_benign | 0.206 | benign | -0.24 | Destabilizing | 0.822 | D | 0.488 | neutral | N | 0.50532029 | None | None | N |
N/L | 0.3412 | ambiguous | 0.3438 | ambiguous | 0.089 | Stabilizing | 0.956 | D | 0.657 | neutral | None | None | None | None | N |
N/M | 0.3639 | ambiguous | 0.369 | ambiguous | 0.572 | Stabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
N/P | 0.8901 | likely_pathogenic | 0.8963 | pathogenic | -0.08 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | N |
N/Q | 0.2679 | likely_benign | 0.28 | benign | -0.734 | Destabilizing | 0.956 | D | 0.452 | neutral | None | None | None | None | N |
N/R | 0.308 | likely_benign | 0.3278 | benign | -0.165 | Destabilizing | 0.956 | D | 0.456 | neutral | None | None | None | None | N |
N/S | 0.1333 | likely_benign | 0.1393 | benign | -0.5 | Destabilizing | 0.822 | D | 0.467 | neutral | D | 0.523212618 | None | None | N |
N/T | 0.2134 | likely_benign | 0.2177 | benign | -0.344 | Destabilizing | 0.904 | D | 0.486 | neutral | N | 0.485460568 | None | None | N |
N/V | 0.4427 | ambiguous | 0.4549 | ambiguous | -0.08 | Destabilizing | 0.978 | D | 0.675 | neutral | None | None | None | None | N |
N/W | 0.7652 | likely_pathogenic | 0.7845 | pathogenic | -0.458 | Destabilizing | 0.998 | D | 0.738 | prob.delet. | None | None | None | None | N |
N/Y | 0.1719 | likely_benign | 0.176 | benign | -0.25 | Destabilizing | 0.942 | D | 0.651 | neutral | N | 0.480661175 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.