Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24397 | 73414;73415;73416 | chr2:178572943;178572942;178572941 | chr2:179437670;179437669;179437668 |
N2AB | 22756 | 68491;68492;68493 | chr2:178572943;178572942;178572941 | chr2:179437670;179437669;179437668 |
N2A | 21829 | 65710;65711;65712 | chr2:178572943;178572942;178572941 | chr2:179437670;179437669;179437668 |
N2B | 15332 | 46219;46220;46221 | chr2:178572943;178572942;178572941 | chr2:179437670;179437669;179437668 |
Novex-1 | 15457 | 46594;46595;46596 | chr2:178572943;178572942;178572941 | chr2:179437670;179437669;179437668 |
Novex-2 | 15524 | 46795;46796;46797 | chr2:178572943;178572942;178572941 | chr2:179437670;179437669;179437668 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1269666445 | -1.083 | 0.884 | N | 0.687 | 0.341 | 0.425851741357 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.64E-05 | None | 0 | None | 0 | 0 | 0 |
I/M | rs1269666445 | -1.083 | 0.884 | N | 0.687 | 0.341 | 0.425851741357 | gnomAD-4.0.0 | 1.59249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78753E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.925 | likely_pathogenic | 0.9166 | pathogenic | -2.569 | Highly Destabilizing | 0.742 | D | 0.768 | deleterious | None | None | None | None | N |
I/C | 0.8945 | likely_pathogenic | 0.8835 | pathogenic | -1.663 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
I/D | 0.9989 | likely_pathogenic | 0.9984 | pathogenic | -3.373 | Highly Destabilizing | 0.984 | D | 0.825 | deleterious | None | None | None | None | N |
I/E | 0.9971 | likely_pathogenic | 0.996 | pathogenic | -3.046 | Highly Destabilizing | 0.984 | D | 0.826 | deleterious | None | None | None | None | N |
I/F | 0.3526 | ambiguous | 0.3456 | ambiguous | -1.543 | Destabilizing | 0.015 | N | 0.382 | neutral | N | 0.328828741 | None | None | N |
I/G | 0.9859 | likely_pathogenic | 0.9825 | pathogenic | -3.177 | Highly Destabilizing | 0.953 | D | 0.799 | deleterious | None | None | None | None | N |
I/H | 0.993 | likely_pathogenic | 0.9913 | pathogenic | -2.887 | Highly Destabilizing | 0.996 | D | 0.833 | deleterious | None | None | None | None | N |
I/K | 0.9943 | likely_pathogenic | 0.9927 | pathogenic | -2.107 | Highly Destabilizing | 0.953 | D | 0.819 | deleterious | None | None | None | None | N |
I/L | 0.1629 | likely_benign | 0.1738 | benign | -0.745 | Destabilizing | 0.003 | N | 0.292 | neutral | N | 0.460241362 | None | None | N |
I/M | 0.2187 | likely_benign | 0.2127 | benign | -0.776 | Destabilizing | 0.884 | D | 0.687 | prob.neutral | N | 0.517521583 | None | None | N |
I/N | 0.9828 | likely_pathogenic | 0.9765 | pathogenic | -2.867 | Highly Destabilizing | 0.979 | D | 0.839 | deleterious | N | 0.490997658 | None | None | N |
I/P | 0.9936 | likely_pathogenic | 0.9928 | pathogenic | -1.344 | Destabilizing | 0.984 | D | 0.835 | deleterious | None | None | None | None | N |
I/Q | 0.9936 | likely_pathogenic | 0.9917 | pathogenic | -2.49 | Highly Destabilizing | 0.984 | D | 0.842 | deleterious | None | None | None | None | N |
I/R | 0.9901 | likely_pathogenic | 0.9872 | pathogenic | -2.205 | Highly Destabilizing | 0.953 | D | 0.839 | deleterious | None | None | None | None | N |
I/S | 0.9767 | likely_pathogenic | 0.9712 | pathogenic | -3.39 | Highly Destabilizing | 0.939 | D | 0.795 | deleterious | N | 0.490490679 | None | None | N |
I/T | 0.9564 | likely_pathogenic | 0.9522 | pathogenic | -2.895 | Highly Destabilizing | 0.684 | D | 0.764 | deleterious | N | 0.490490679 | None | None | N |
I/V | 0.1283 | likely_benign | 0.1248 | benign | -1.344 | Destabilizing | 0.028 | N | 0.207 | neutral | N | 0.418429238 | None | None | N |
I/W | 0.982 | likely_pathogenic | 0.9769 | pathogenic | -1.962 | Destabilizing | 0.996 | D | 0.825 | deleterious | None | None | None | None | N |
I/Y | 0.8964 | likely_pathogenic | 0.8795 | pathogenic | -1.705 | Destabilizing | 0.835 | D | 0.75 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.