Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24405 | 73438;73439;73440 | chr2:178572919;178572918;178572917 | chr2:179437646;179437645;179437644 |
N2AB | 22764 | 68515;68516;68517 | chr2:178572919;178572918;178572917 | chr2:179437646;179437645;179437644 |
N2A | 21837 | 65734;65735;65736 | chr2:178572919;178572918;178572917 | chr2:179437646;179437645;179437644 |
N2B | 15340 | 46243;46244;46245 | chr2:178572919;178572918;178572917 | chr2:179437646;179437645;179437644 |
Novex-1 | 15465 | 46618;46619;46620 | chr2:178572919;178572918;178572917 | chr2:179437646;179437645;179437644 |
Novex-2 | 15532 | 46819;46820;46821 | chr2:178572919;178572918;178572917 | chr2:179437646;179437645;179437644 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1027579307 | 0.003 | 0.981 | N | 0.506 | 0.21 | 0.252681307341 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1027579307 | 0.003 | 0.981 | N | 0.506 | 0.21 | 0.252681307341 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | I | None | 0 | 2.28728E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs764485436 | 0.746 | 0.989 | N | 0.601 | 0.369 | 0.365703291355 | gnomAD-2.1.1 | 3.23E-05 | None | None | None | None | I | None | 0 | 5.81E-05 | None | 0 | 2.81658E-04 | None | 0 | None | 0 | 8.93E-06 | 0 |
E/K | rs764485436 | 0.746 | 0.989 | N | 0.601 | 0.369 | 0.365703291355 | gnomAD-4.0.0 | 1.02659E-05 | None | None | None | None | I | None | 0 | 4.47407E-05 | None | 0 | 1.01199E-04 | None | 0 | 0 | 5.39758E-06 | 2.31889E-05 | 1.65739E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1358 | likely_benign | 0.15 | benign | -0.269 | Destabilizing | 0.805 | D | 0.589 | neutral | N | 0.372390304 | None | None | I |
E/C | 0.7983 | likely_pathogenic | 0.8031 | pathogenic | 0.065 | Stabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | I |
E/D | 0.4156 | ambiguous | 0.3993 | ambiguous | -0.226 | Destabilizing | 0.981 | D | 0.506 | neutral | N | 0.489966836 | None | None | I |
E/F | 0.8237 | likely_pathogenic | 0.8546 | pathogenic | -0.275 | Destabilizing | 0.975 | D | 0.724 | prob.delet. | None | None | None | None | I |
E/G | 0.2929 | likely_benign | 0.3098 | benign | -0.415 | Destabilizing | 0.983 | D | 0.594 | neutral | N | 0.473477231 | None | None | I |
E/H | 0.5875 | likely_pathogenic | 0.6302 | pathogenic | 0.077 | Stabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | I |
E/I | 0.3402 | ambiguous | 0.3692 | ambiguous | 0.068 | Stabilizing | 0.845 | D | 0.651 | neutral | None | None | None | None | I |
E/K | 0.1893 | likely_benign | 0.2168 | benign | 0.513 | Stabilizing | 0.989 | D | 0.601 | neutral | N | 0.476440178 | None | None | I |
E/L | 0.5082 | ambiguous | 0.5235 | ambiguous | 0.068 | Stabilizing | 0.845 | D | 0.639 | neutral | None | None | None | None | I |
E/M | 0.4654 | ambiguous | 0.4935 | ambiguous | 0.143 | Stabilizing | 0.997 | D | 0.696 | prob.neutral | None | None | None | None | I |
E/N | 0.4624 | ambiguous | 0.4807 | ambiguous | 0.245 | Stabilizing | 0.996 | D | 0.579 | neutral | None | None | None | None | I |
E/P | 0.9533 | likely_pathogenic | 0.9531 | pathogenic | -0.025 | Destabilizing | 0.996 | D | 0.621 | neutral | None | None | None | None | I |
E/Q | 0.1572 | likely_benign | 0.1748 | benign | 0.258 | Stabilizing | 0.998 | D | 0.544 | neutral | N | 0.469034203 | None | None | I |
E/R | 0.3296 | likely_benign | 0.3699 | ambiguous | 0.651 | Stabilizing | 0.987 | D | 0.581 | neutral | None | None | None | None | I |
E/S | 0.2928 | likely_benign | 0.3112 | benign | 0.1 | Stabilizing | 0.957 | D | 0.592 | neutral | None | None | None | None | I |
E/T | 0.3409 | ambiguous | 0.355 | ambiguous | 0.226 | Stabilizing | 0.916 | D | 0.619 | neutral | None | None | None | None | I |
E/V | 0.1928 | likely_benign | 0.2078 | benign | -0.025 | Destabilizing | 0.025 | N | 0.449 | neutral | N | 0.39813411 | None | None | I |
E/W | 0.9565 | likely_pathogenic | 0.9651 | pathogenic | -0.169 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
E/Y | 0.722 | likely_pathogenic | 0.7663 | pathogenic | -0.036 | Destabilizing | 0.987 | D | 0.701 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.