Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24409 | 73450;73451;73452 | chr2:178572907;178572906;178572905 | chr2:179437634;179437633;179437632 |
N2AB | 22768 | 68527;68528;68529 | chr2:178572907;178572906;178572905 | chr2:179437634;179437633;179437632 |
N2A | 21841 | 65746;65747;65748 | chr2:178572907;178572906;178572905 | chr2:179437634;179437633;179437632 |
N2B | 15344 | 46255;46256;46257 | chr2:178572907;178572906;178572905 | chr2:179437634;179437633;179437632 |
Novex-1 | 15469 | 46630;46631;46632 | chr2:178572907;178572906;178572905 | chr2:179437634;179437633;179437632 |
Novex-2 | 15536 | 46831;46832;46833 | chr2:178572907;178572906;178572905 | chr2:179437634;179437633;179437632 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs762601217 | -0.413 | 1.0 | N | 0.658 | 0.323 | 0.265929055128 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs762601217 | -0.413 | 1.0 | N | 0.658 | 0.323 | 0.265929055128 | gnomAD-4.0.0 | 1.59221E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78396E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3842 | ambiguous | 0.3532 | ambiguous | -0.569 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.511958261 | None | None | I |
E/C | 0.9343 | likely_pathogenic | 0.9265 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/D | 0.1316 | likely_benign | 0.127 | benign | -0.501 | Destabilizing | 0.999 | D | 0.545 | neutral | N | 0.504840288 | None | None | I |
E/F | 0.8989 | likely_pathogenic | 0.8861 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
E/G | 0.441 | ambiguous | 0.4088 | ambiguous | -0.807 | Destabilizing | 1.0 | D | 0.666 | neutral | N | 0.520730799 | None | None | I |
E/H | 0.7644 | likely_pathogenic | 0.7337 | pathogenic | 0.194 | Stabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | I |
E/I | 0.5807 | likely_pathogenic | 0.536 | ambiguous | 0.044 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
E/K | 0.3557 | ambiguous | 0.3146 | benign | 0.027 | Stabilizing | 0.999 | D | 0.641 | neutral | D | 0.522636615 | None | None | I |
E/L | 0.6353 | likely_pathogenic | 0.5911 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/M | 0.675 | likely_pathogenic | 0.6322 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
E/N | 0.4227 | ambiguous | 0.3939 | ambiguous | -0.454 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/P | 0.6722 | likely_pathogenic | 0.694 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/Q | 0.288 | likely_benign | 0.2542 | benign | -0.373 | Destabilizing | 1.0 | D | 0.658 | neutral | N | 0.481332738 | None | None | I |
E/R | 0.5713 | likely_pathogenic | 0.5274 | ambiguous | 0.423 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/S | 0.407 | ambiguous | 0.377 | ambiguous | -0.632 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/T | 0.4858 | ambiguous | 0.4452 | ambiguous | -0.425 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/V | 0.418 | ambiguous | 0.3734 | ambiguous | -0.141 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.482600186 | None | None | I |
E/W | 0.9722 | likely_pathogenic | 0.9681 | pathogenic | 0.103 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/Y | 0.8108 | likely_pathogenic | 0.7887 | pathogenic | 0.11 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.