Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24414 | 73465;73466;73467 | chr2:178572892;178572891;178572890 | chr2:179437619;179437618;179437617 |
N2AB | 22773 | 68542;68543;68544 | chr2:178572892;178572891;178572890 | chr2:179437619;179437618;179437617 |
N2A | 21846 | 65761;65762;65763 | chr2:178572892;178572891;178572890 | chr2:179437619;179437618;179437617 |
N2B | 15349 | 46270;46271;46272 | chr2:178572892;178572891;178572890 | chr2:179437619;179437618;179437617 |
Novex-1 | 15474 | 46645;46646;46647 | chr2:178572892;178572891;178572890 | chr2:179437619;179437618;179437617 |
Novex-2 | 15541 | 46846;46847;46848 | chr2:178572892;178572891;178572890 | chr2:179437619;179437618;179437617 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs769320646 | None | 0.987 | N | 0.634 | 0.46 | 0.527557778142 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
P/R | rs769320646 | None | 0.987 | N | 0.634 | 0.46 | 0.527557778142 | gnomAD-4.0.0 | 2.05312E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69879E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1156 | likely_benign | 0.1083 | benign | -0.441 | Destabilizing | 0.032 | N | 0.418 | neutral | N | 0.521815469 | None | None | I |
P/C | 0.6137 | likely_pathogenic | 0.5783 | pathogenic | -0.697 | Destabilizing | 0.997 | D | 0.666 | prob.neutral | None | None | None | None | I |
P/D | 0.6368 | likely_pathogenic | 0.5609 | ambiguous | -0.476 | Destabilizing | 0.99 | D | 0.709 | prob.delet. | None | None | None | None | I |
P/E | 0.4447 | ambiguous | 0.3724 | ambiguous | -0.577 | Destabilizing | 0.98 | D | 0.727 | deleterious | None | None | None | None | I |
P/F | 0.6472 | likely_pathogenic | 0.604 | pathogenic | -0.675 | Destabilizing | 0.997 | D | 0.642 | neutral | None | None | None | None | I |
P/G | 0.419 | ambiguous | 0.3806 | ambiguous | -0.558 | Destabilizing | 0.875 | D | 0.659 | prob.neutral | None | None | None | None | I |
P/H | 0.3159 | likely_benign | 0.2817 | benign | -0.13 | Destabilizing | 0.999 | D | 0.638 | neutral | N | 0.488585483 | None | None | I |
P/I | 0.4301 | ambiguous | 0.4021 | ambiguous | -0.273 | Destabilizing | 0.98 | D | 0.653 | prob.neutral | None | None | None | None | I |
P/K | 0.5057 | ambiguous | 0.4253 | ambiguous | -0.526 | Destabilizing | 0.98 | D | 0.732 | deleterious | None | None | None | None | I |
P/L | 0.1706 | likely_benign | 0.1608 | benign | -0.273 | Destabilizing | 0.949 | D | 0.627 | neutral | N | 0.488496578 | None | None | I |
P/M | 0.3873 | ambiguous | 0.3633 | ambiguous | -0.519 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
P/N | 0.4556 | ambiguous | 0.4228 | ambiguous | -0.305 | Destabilizing | 0.99 | D | 0.647 | neutral | None | None | None | None | I |
P/Q | 0.2591 | likely_benign | 0.2237 | benign | -0.516 | Destabilizing | 0.99 | D | 0.675 | prob.neutral | None | None | None | None | I |
P/R | 0.376 | ambiguous | 0.3139 | benign | -0.043 | Destabilizing | 0.987 | D | 0.634 | neutral | N | 0.510613304 | None | None | I |
P/S | 0.1822 | likely_benign | 0.167 | benign | -0.603 | Destabilizing | 0.949 | D | 0.738 | deleterious | N | 0.490319126 | None | None | I |
P/T | 0.1418 | likely_benign | 0.1302 | benign | -0.607 | Destabilizing | 0.974 | D | 0.689 | prob.delet. | N | 0.50305635 | None | None | I |
P/V | 0.2929 | likely_benign | 0.2729 | benign | -0.297 | Destabilizing | 0.961 | D | 0.607 | neutral | None | None | None | None | I |
P/W | 0.7955 | likely_pathogenic | 0.7526 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
P/Y | 0.6246 | likely_pathogenic | 0.5864 | pathogenic | -0.481 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.