Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24420 | 73483;73484;73485 | chr2:178572874;178572873;178572872 | chr2:179437601;179437600;179437599 |
N2AB | 22779 | 68560;68561;68562 | chr2:178572874;178572873;178572872 | chr2:179437601;179437600;179437599 |
N2A | 21852 | 65779;65780;65781 | chr2:178572874;178572873;178572872 | chr2:179437601;179437600;179437599 |
N2B | 15355 | 46288;46289;46290 | chr2:178572874;178572873;178572872 | chr2:179437601;179437600;179437599 |
Novex-1 | 15480 | 46663;46664;46665 | chr2:178572874;178572873;178572872 | chr2:179437601;179437600;179437599 |
Novex-2 | 15547 | 46864;46865;46866 | chr2:178572874;178572873;178572872 | chr2:179437601;179437600;179437599 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1265445775 | None | 0.032 | N | 0.265 | 0.324 | 0.243398259712 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1265445775 | None | 0.032 | N | 0.265 | 0.324 | 0.243398259712 | gnomAD-4.0.0 | 7.69014E-06 | None | None | None | None | N | None | 3.38284E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.13837E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1568 | likely_benign | 0.1589 | benign | -0.397 | Destabilizing | 0.841 | D | 0.448 | neutral | N | 0.450227517 | None | None | N |
E/C | 0.7864 | likely_pathogenic | 0.8057 | pathogenic | -0.005 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
E/D | 0.3551 | ambiguous | 0.354 | ambiguous | -0.887 | Destabilizing | 0.914 | D | 0.37 | neutral | N | 0.480929389 | None | None | N |
E/F | 0.8355 | likely_pathogenic | 0.8335 | pathogenic | -0.642 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
E/G | 0.2502 | likely_benign | 0.2526 | benign | -0.653 | Destabilizing | 0.974 | D | 0.548 | neutral | D | 0.526784146 | None | None | N |
E/H | 0.6077 | likely_pathogenic | 0.6024 | pathogenic | -0.962 | Destabilizing | 0.997 | D | 0.585 | neutral | None | None | None | None | N |
E/I | 0.3251 | likely_benign | 0.3181 | benign | 0.258 | Stabilizing | 0.99 | D | 0.784 | deleterious | None | None | None | None | N |
E/K | 0.1605 | likely_benign | 0.1499 | benign | -0.164 | Destabilizing | 0.032 | N | 0.265 | neutral | N | 0.425155714 | None | None | N |
E/L | 0.4607 | ambiguous | 0.4512 | ambiguous | 0.258 | Stabilizing | 0.98 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/M | 0.4212 | ambiguous | 0.4153 | ambiguous | 0.694 | Stabilizing | 0.999 | D | 0.739 | deleterious | None | None | None | None | N |
E/N | 0.4793 | ambiguous | 0.4858 | ambiguous | -0.355 | Destabilizing | 0.98 | D | 0.573 | neutral | None | None | None | None | N |
E/P | 0.9704 | likely_pathogenic | 0.9672 | pathogenic | 0.062 | Stabilizing | 0.99 | D | 0.646 | neutral | None | None | None | None | N |
E/Q | 0.1267 | likely_benign | 0.1248 | benign | -0.318 | Destabilizing | 0.914 | D | 0.553 | neutral | N | 0.512353411 | None | None | N |
E/R | 0.2824 | likely_benign | 0.2706 | benign | -0.176 | Destabilizing | 0.961 | D | 0.602 | neutral | None | None | None | None | N |
E/S | 0.2441 | likely_benign | 0.2571 | benign | -0.578 | Destabilizing | 0.933 | D | 0.501 | neutral | None | None | None | None | N |
E/T | 0.2106 | likely_benign | 0.2104 | benign | -0.379 | Destabilizing | 0.98 | D | 0.567 | neutral | None | None | None | None | N |
E/V | 0.1706 | likely_benign | 0.1692 | benign | 0.062 | Stabilizing | 0.974 | D | 0.678 | prob.neutral | N | 0.497250673 | None | None | N |
E/W | 0.949 | likely_pathogenic | 0.9473 | pathogenic | -0.673 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
E/Y | 0.7848 | likely_pathogenic | 0.7887 | pathogenic | -0.45 | Destabilizing | 0.997 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.