Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24421 | 73486;73487;73488 | chr2:178572871;178572870;178572869 | chr2:179437598;179437597;179437596 |
N2AB | 22780 | 68563;68564;68565 | chr2:178572871;178572870;178572869 | chr2:179437598;179437597;179437596 |
N2A | 21853 | 65782;65783;65784 | chr2:178572871;178572870;178572869 | chr2:179437598;179437597;179437596 |
N2B | 15356 | 46291;46292;46293 | chr2:178572871;178572870;178572869 | chr2:179437598;179437597;179437596 |
Novex-1 | 15481 | 46666;46667;46668 | chr2:178572871;178572870;178572869 | chr2:179437598;179437597;179437596 |
Novex-2 | 15548 | 46867;46868;46869 | chr2:178572871;178572870;178572869 | chr2:179437598;179437597;179437596 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.002 | N | 0.287 | 0.05 | 0.0986583533028 | gnomAD-4.0.0 | 1.59203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85943E-06 | 0 | 0 |
D/N | None | None | 0.693 | D | 0.761 | 0.257 | 0.389283895039 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3859 | ambiguous | 0.4032 | ambiguous | -0.254 | Destabilizing | 0.244 | N | 0.589 | neutral | N | 0.517876661 | None | None | N |
D/C | 0.853 | likely_pathogenic | 0.8751 | pathogenic | 0.182 | Stabilizing | 0.986 | D | 0.875 | deleterious | None | None | None | None | N |
D/E | 0.104 | likely_benign | 0.0913 | benign | -0.284 | Destabilizing | 0.002 | N | 0.287 | neutral | N | 0.414152073 | None | None | N |
D/F | 0.862 | likely_pathogenic | 0.8862 | pathogenic | -0.38 | Destabilizing | 0.986 | D | 0.796 | deleterious | None | None | None | None | N |
D/G | 0.4527 | ambiguous | 0.4671 | ambiguous | -0.406 | Destabilizing | 0.392 | N | 0.711 | prob.delet. | N | 0.502289328 | None | None | N |
D/H | 0.6951 | likely_pathogenic | 0.7359 | pathogenic | -0.227 | Destabilizing | 0.945 | D | 0.81 | deleterious | D | 0.533827548 | None | None | N |
D/I | 0.6219 | likely_pathogenic | 0.6625 | pathogenic | 0.087 | Stabilizing | 0.858 | D | 0.805 | deleterious | None | None | None | None | N |
D/K | 0.7175 | likely_pathogenic | 0.7116 | pathogenic | 0.459 | Stabilizing | 0.6 | D | 0.723 | deleterious | None | None | None | None | N |
D/L | 0.6027 | likely_pathogenic | 0.6306 | pathogenic | 0.087 | Stabilizing | 0.749 | D | 0.759 | deleterious | None | None | None | None | N |
D/M | 0.7976 | likely_pathogenic | 0.8145 | pathogenic | 0.275 | Stabilizing | 0.986 | D | 0.859 | deleterious | None | None | None | None | N |
D/N | 0.2363 | likely_benign | 0.2673 | benign | 0.25 | Stabilizing | 0.693 | D | 0.761 | deleterious | D | 0.522186403 | None | None | N |
D/P | 0.7994 | likely_pathogenic | 0.7974 | pathogenic | -0.006 | Destabilizing | 0.858 | D | 0.783 | deleterious | None | None | None | None | N |
D/Q | 0.5668 | likely_pathogenic | 0.5887 | pathogenic | 0.248 | Stabilizing | 0.6 | D | 0.797 | deleterious | None | None | None | None | N |
D/R | 0.8009 | likely_pathogenic | 0.8008 | pathogenic | 0.506 | Stabilizing | 0.6 | D | 0.763 | deleterious | None | None | None | None | N |
D/S | 0.363 | ambiguous | 0.3948 | ambiguous | 0.162 | Stabilizing | 0.299 | N | 0.709 | prob.delet. | None | None | None | None | N |
D/T | 0.546 | ambiguous | 0.5718 | pathogenic | 0.279 | Stabilizing | 0.749 | D | 0.763 | deleterious | None | None | None | None | N |
D/V | 0.4162 | ambiguous | 0.4409 | ambiguous | -0.006 | Destabilizing | 0.693 | D | 0.759 | deleterious | N | 0.503556775 | None | None | N |
D/W | 0.9666 | likely_pathogenic | 0.9697 | pathogenic | -0.3 | Destabilizing | 0.986 | D | 0.856 | deleterious | None | None | None | None | N |
D/Y | 0.5426 | ambiguous | 0.5888 | pathogenic | -0.153 | Destabilizing | 0.981 | D | 0.805 | deleterious | N | 0.503810265 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.