Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24436 | 73531;73532;73533 | chr2:178572826;178572825;178572824 | chr2:179437553;179437552;179437551 |
N2AB | 22795 | 68608;68609;68610 | chr2:178572826;178572825;178572824 | chr2:179437553;179437552;179437551 |
N2A | 21868 | 65827;65828;65829 | chr2:178572826;178572825;178572824 | chr2:179437553;179437552;179437551 |
N2B | 15371 | 46336;46337;46338 | chr2:178572826;178572825;178572824 | chr2:179437553;179437552;179437551 |
Novex-1 | 15496 | 46711;46712;46713 | chr2:178572826;178572825;178572824 | chr2:179437553;179437552;179437551 |
Novex-2 | 15563 | 46912;46913;46914 | chr2:178572826;178572825;178572824 | chr2:179437553;179437552;179437551 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.805 | D | 0.622 | 0.254 | 0.343101102393 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs1708726182 | None | 0.935 | D | 0.622 | 0.297 | 0.235038932564 | gnomAD-4.0.0 | 1.3687E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7992E-06 | 0 | 0 |
K/Q | rs1301799099 | None | 0.983 | N | 0.662 | 0.35 | 0.229924730088 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/Q | rs1301799099 | None | 0.983 | N | 0.662 | 0.35 | 0.229924730088 | gnomAD-4.0.0 | 6.57583E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47106E-05 | 0 | 0 |
K/R | None | None | 0.944 | N | 0.621 | 0.295 | 0.313818047136 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.905 | likely_pathogenic | 0.9188 | pathogenic | 0.035 | Stabilizing | 0.916 | D | 0.635 | neutral | None | None | None | None | I |
K/C | 0.961 | likely_pathogenic | 0.9656 | pathogenic | -0.165 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
K/D | 0.9275 | likely_pathogenic | 0.9355 | pathogenic | 0.083 | Stabilizing | 0.033 | N | 0.411 | neutral | None | None | None | None | I |
K/E | 0.7983 | likely_pathogenic | 0.8113 | pathogenic | 0.094 | Stabilizing | 0.805 | D | 0.622 | neutral | D | 0.527378792 | None | None | I |
K/F | 0.9934 | likely_pathogenic | 0.9945 | pathogenic | -0.145 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/G | 0.8879 | likely_pathogenic | 0.8996 | pathogenic | -0.171 | Destabilizing | 0.916 | D | 0.567 | neutral | None | None | None | None | I |
K/H | 0.701 | likely_pathogenic | 0.7333 | pathogenic | -0.433 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | I |
K/I | 0.9652 | likely_pathogenic | 0.9697 | pathogenic | 0.499 | Stabilizing | 0.983 | D | 0.705 | prob.neutral | N | 0.515037985 | None | None | I |
K/L | 0.9122 | likely_pathogenic | 0.9206 | pathogenic | 0.499 | Stabilizing | 0.987 | D | 0.609 | neutral | None | None | None | None | I |
K/M | 0.8592 | likely_pathogenic | 0.8696 | pathogenic | 0.247 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
K/N | 0.8777 | likely_pathogenic | 0.8953 | pathogenic | 0.231 | Stabilizing | 0.935 | D | 0.622 | neutral | D | 0.5285923 | None | None | I |
K/P | 0.979 | likely_pathogenic | 0.9781 | pathogenic | 0.373 | Stabilizing | 0.987 | D | 0.653 | neutral | None | None | None | None | I |
K/Q | 0.4713 | ambiguous | 0.5042 | ambiguous | 0.077 | Stabilizing | 0.983 | D | 0.662 | neutral | N | 0.484262733 | None | None | I |
K/R | 0.1127 | likely_benign | 0.1186 | benign | -0.055 | Destabilizing | 0.944 | D | 0.621 | neutral | N | 0.487764398 | None | None | I |
K/S | 0.9066 | likely_pathogenic | 0.9198 | pathogenic | -0.244 | Destabilizing | 0.916 | D | 0.641 | neutral | None | None | None | None | I |
K/T | 0.7871 | likely_pathogenic | 0.806 | pathogenic | -0.084 | Destabilizing | 0.967 | D | 0.609 | neutral | N | 0.495919772 | None | None | I |
K/V | 0.9391 | likely_pathogenic | 0.9452 | pathogenic | 0.373 | Stabilizing | 0.987 | D | 0.661 | neutral | None | None | None | None | I |
K/W | 0.982 | likely_pathogenic | 0.9833 | pathogenic | -0.176 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
K/Y | 0.965 | likely_pathogenic | 0.9695 | pathogenic | 0.176 | Stabilizing | 0.996 | D | 0.668 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.