Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24437 | 73534;73535;73536 | chr2:178572823;178572822;178572821 | chr2:179437550;179437549;179437548 |
N2AB | 22796 | 68611;68612;68613 | chr2:178572823;178572822;178572821 | chr2:179437550;179437549;179437548 |
N2A | 21869 | 65830;65831;65832 | chr2:178572823;178572822;178572821 | chr2:179437550;179437549;179437548 |
N2B | 15372 | 46339;46340;46341 | chr2:178572823;178572822;178572821 | chr2:179437550;179437549;179437548 |
Novex-1 | 15497 | 46714;46715;46716 | chr2:178572823;178572822;178572821 | chr2:179437550;179437549;179437548 |
Novex-2 | 15564 | 46915;46916;46917 | chr2:178572823;178572822;178572821 | chr2:179437550;179437549;179437548 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.6 | 0.16 | 0.544738774389 | gnomAD-4.0.0 | 6.84341E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15955E-05 | 0 |
V/D | None | None | 1.0 | N | 0.747 | 0.401 | 0.818452415539 | gnomAD-4.0.0 | 1.36868E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79921E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1761 | likely_benign | 0.2303 | benign | -0.827 | Destabilizing | 0.999 | D | 0.6 | neutral | N | 0.461692517 | None | None | I |
V/C | 0.7355 | likely_pathogenic | 0.801 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
V/D | 0.6762 | likely_pathogenic | 0.7315 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.480048992 | None | None | I |
V/E | 0.5731 | likely_pathogenic | 0.6134 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
V/F | 0.2342 | likely_benign | 0.305 | benign | -0.875 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.513102773 | None | None | I |
V/G | 0.2478 | likely_benign | 0.2911 | benign | -1.009 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.455806695 | None | None | I |
V/H | 0.7412 | likely_pathogenic | 0.8013 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
V/I | 0.0747 | likely_benign | 0.0862 | benign | -0.482 | Destabilizing | 0.997 | D | 0.547 | neutral | N | 0.462865953 | None | None | I |
V/K | 0.7138 | likely_pathogenic | 0.7478 | pathogenic | -0.606 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
V/L | 0.1818 | likely_benign | 0.2992 | benign | -0.482 | Destabilizing | 0.997 | D | 0.59 | neutral | N | 0.519623313 | None | None | I |
V/M | 0.1172 | likely_benign | 0.1722 | benign | -0.422 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
V/N | 0.3266 | likely_benign | 0.3918 | ambiguous | -0.337 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
V/P | 0.7077 | likely_pathogenic | 0.7418 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
V/Q | 0.5128 | ambiguous | 0.579 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
V/R | 0.6858 | likely_pathogenic | 0.7224 | pathogenic | -0.096 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
V/S | 0.2444 | likely_benign | 0.3064 | benign | -0.804 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
V/T | 0.1474 | likely_benign | 0.1786 | benign | -0.79 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
V/W | 0.8399 | likely_pathogenic | 0.8996 | pathogenic | -0.93 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
V/Y | 0.6331 | likely_pathogenic | 0.7121 | pathogenic | -0.643 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.