Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2445 | 7558;7559;7560 | chr2:178773723;178773722;178773721 | chr2:179638450;179638449;179638448 |
N2AB | 2445 | 7558;7559;7560 | chr2:178773723;178773722;178773721 | chr2:179638450;179638449;179638448 |
N2A | 2445 | 7558;7559;7560 | chr2:178773723;178773722;178773721 | chr2:179638450;179638449;179638448 |
N2B | 2399 | 7420;7421;7422 | chr2:178773723;178773722;178773721 | chr2:179638450;179638449;179638448 |
Novex-1 | 2399 | 7420;7421;7422 | chr2:178773723;178773722;178773721 | chr2:179638450;179638449;179638448 |
Novex-2 | 2399 | 7420;7421;7422 | chr2:178773723;178773722;178773721 | chr2:179638450;179638449;179638448 |
Novex-3 | 2445 | 7558;7559;7560 | chr2:178773723;178773722;178773721 | chr2:179638450;179638449;179638448 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.999 | D | 0.585 | 0.658 | 0.838309375149 | gnomAD-4.0.0 | 3.60349E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.94021E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2728 | likely_benign | 0.2746 | benign | -0.915 | Destabilizing | 0.948 | D | 0.543 | neutral | N | 0.506035732 | None | None | I |
V/C | 0.8747 | likely_pathogenic | 0.8712 | pathogenic | -0.881 | Destabilizing | 1.0 | D | 0.494 | neutral | None | None | None | None | I |
V/D | 0.9412 | likely_pathogenic | 0.9478 | pathogenic | -0.512 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | I |
V/E | 0.8844 | likely_pathogenic | 0.8958 | pathogenic | -0.556 | Destabilizing | 0.999 | D | 0.533 | neutral | D | 0.541237069 | None | None | I |
V/F | 0.5731 | likely_pathogenic | 0.5838 | pathogenic | -0.782 | Destabilizing | 0.998 | D | 0.464 | neutral | None | None | None | None | I |
V/G | 0.6079 | likely_pathogenic | 0.6124 | pathogenic | -1.163 | Destabilizing | 0.999 | D | 0.585 | neutral | D | 0.541795808 | None | None | I |
V/H | 0.9676 | likely_pathogenic | 0.9713 | pathogenic | -0.707 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | I |
V/I | 0.1057 | likely_benign | 0.1048 | benign | -0.371 | Destabilizing | 0.246 | N | 0.301 | neutral | None | None | None | None | I |
V/K | 0.928 | likely_pathogenic | 0.9362 | pathogenic | -0.87 | Destabilizing | 0.999 | D | 0.533 | neutral | None | None | None | None | I |
V/L | 0.4703 | ambiguous | 0.468 | ambiguous | -0.371 | Destabilizing | 0.9 | D | 0.488 | neutral | N | 0.497866407 | None | None | I |
V/M | 0.3249 | likely_benign | 0.3308 | benign | -0.433 | Destabilizing | 0.997 | D | 0.463 | neutral | N | 0.506413469 | None | None | I |
V/N | 0.8677 | likely_pathogenic | 0.874 | pathogenic | -0.659 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | I |
V/P | 0.7944 | likely_pathogenic | 0.7979 | pathogenic | -0.516 | Destabilizing | 0.999 | D | 0.523 | neutral | None | None | None | None | I |
V/Q | 0.9023 | likely_pathogenic | 0.9097 | pathogenic | -0.81 | Destabilizing | 0.999 | D | 0.523 | neutral | None | None | None | None | I |
V/R | 0.903 | likely_pathogenic | 0.9114 | pathogenic | -0.403 | Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | I |
V/S | 0.5917 | likely_pathogenic | 0.5974 | pathogenic | -1.135 | Destabilizing | 0.999 | D | 0.502 | neutral | None | None | None | None | I |
V/T | 0.3484 | ambiguous | 0.338 | benign | -1.06 | Destabilizing | 0.992 | D | 0.467 | neutral | None | None | None | None | I |
V/W | 0.9819 | likely_pathogenic | 0.984 | pathogenic | -0.919 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
V/Y | 0.9366 | likely_pathogenic | 0.9419 | pathogenic | -0.621 | Destabilizing | 0.999 | D | 0.452 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.