Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24451 | 73576;73577;73578 | chr2:178572781;178572780;178572779 | chr2:179437508;179437507;179437506 |
N2AB | 22810 | 68653;68654;68655 | chr2:178572781;178572780;178572779 | chr2:179437508;179437507;179437506 |
N2A | 21883 | 65872;65873;65874 | chr2:178572781;178572780;178572779 | chr2:179437508;179437507;179437506 |
N2B | 15386 | 46381;46382;46383 | chr2:178572781;178572780;178572779 | chr2:179437508;179437507;179437506 |
Novex-1 | 15511 | 46756;46757;46758 | chr2:178572781;178572780;178572779 | chr2:179437508;179437507;179437506 |
Novex-2 | 15578 | 46957;46958;46959 | chr2:178572781;178572780;178572779 | chr2:179437508;179437507;179437506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.142 | N | 0.544 | 0.394 | 0.509878532422 | gnomAD-4.0.0 | 1.59192E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02517E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1958 | likely_benign | 0.2175 | benign | -0.938 | Destabilizing | 0.958 | D | 0.632 | neutral | D | 0.532710041 | None | None | I |
P/C | 0.8429 | likely_pathogenic | 0.8606 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
P/D | 0.9109 | likely_pathogenic | 0.9171 | pathogenic | -0.576 | Destabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | I |
P/E | 0.7958 | likely_pathogenic | 0.8133 | pathogenic | -0.556 | Destabilizing | 0.991 | D | 0.717 | prob.delet. | None | None | None | None | I |
P/F | 0.9223 | likely_pathogenic | 0.9344 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
P/G | 0.6665 | likely_pathogenic | 0.6851 | pathogenic | -1.226 | Destabilizing | 0.991 | D | 0.706 | prob.neutral | None | None | None | None | I |
P/H | 0.6432 | likely_pathogenic | 0.6661 | pathogenic | -0.555 | Destabilizing | 0.998 | D | 0.769 | deleterious | N | 0.488477487 | None | None | I |
P/I | 0.7349 | likely_pathogenic | 0.7564 | pathogenic | -0.257 | Destabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | I |
P/K | 0.779 | likely_pathogenic | 0.7883 | pathogenic | -0.748 | Destabilizing | 0.938 | D | 0.705 | prob.neutral | None | None | None | None | I |
P/L | 0.3663 | ambiguous | 0.4031 | ambiguous | -0.257 | Destabilizing | 0.988 | D | 0.757 | deleterious | N | 0.491693491 | None | None | I |
P/M | 0.6556 | likely_pathogenic | 0.6814 | pathogenic | -0.418 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
P/N | 0.7203 | likely_pathogenic | 0.7422 | pathogenic | -0.728 | Destabilizing | 0.991 | D | 0.759 | deleterious | None | None | None | None | I |
P/Q | 0.5535 | ambiguous | 0.5797 | pathogenic | -0.807 | Destabilizing | 0.991 | D | 0.784 | deleterious | None | None | None | None | I |
P/R | 0.6605 | likely_pathogenic | 0.6792 | pathogenic | -0.321 | Destabilizing | 0.142 | N | 0.544 | neutral | N | 0.512604127 | None | None | I |
P/S | 0.34 | ambiguous | 0.3824 | ambiguous | -1.224 | Destabilizing | 0.988 | D | 0.705 | prob.neutral | N | 0.48218361 | None | None | I |
P/T | 0.2072 | likely_benign | 0.2261 | benign | -1.083 | Destabilizing | 0.988 | D | 0.735 | prob.delet. | N | 0.448648649 | None | None | I |
P/V | 0.5385 | ambiguous | 0.5645 | pathogenic | -0.449 | Destabilizing | 0.995 | D | 0.761 | deleterious | None | None | None | None | I |
P/W | 0.9621 | likely_pathogenic | 0.9667 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
P/Y | 0.8961 | likely_pathogenic | 0.9104 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.