Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24452 | 73579;73580;73581 | chr2:178572778;178572777;178572776 | chr2:179437505;179437504;179437503 |
N2AB | 22811 | 68656;68657;68658 | chr2:178572778;178572777;178572776 | chr2:179437505;179437504;179437503 |
N2A | 21884 | 65875;65876;65877 | chr2:178572778;178572777;178572776 | chr2:179437505;179437504;179437503 |
N2B | 15387 | 46384;46385;46386 | chr2:178572778;178572777;178572776 | chr2:179437505;179437504;179437503 |
Novex-1 | 15512 | 46759;46760;46761 | chr2:178572778;178572777;178572776 | chr2:179437505;179437504;179437503 |
Novex-2 | 15579 | 46960;46961;46962 | chr2:178572778;178572777;178572776 | chr2:179437505;179437504;179437503 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1708703348 | None | 0.011 | N | 0.229 | 0.082 | 0.312001716656 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9224 | likely_pathogenic | 0.9302 | pathogenic | -1.819 | Destabilizing | 0.845 | D | 0.569 | neutral | None | None | None | None | I |
I/C | 0.9388 | likely_pathogenic | 0.9407 | pathogenic | -1.295 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | I |
I/D | 0.9988 | likely_pathogenic | 0.9988 | pathogenic | -0.928 | Destabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | I |
I/E | 0.9946 | likely_pathogenic | 0.9946 | pathogenic | -0.866 | Destabilizing | 0.987 | D | 0.761 | deleterious | None | None | None | None | I |
I/F | 0.3621 | ambiguous | 0.3487 | ambiguous | -1.111 | Destabilizing | 0.967 | D | 0.616 | neutral | N | 0.500085908 | None | None | I |
I/G | 0.9892 | likely_pathogenic | 0.9907 | pathogenic | -2.209 | Highly Destabilizing | 0.987 | D | 0.761 | deleterious | None | None | None | None | I |
I/H | 0.9876 | likely_pathogenic | 0.9864 | pathogenic | -1.344 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | I |
I/K | 0.9873 | likely_pathogenic | 0.9872 | pathogenic | -1.262 | Destabilizing | 0.987 | D | 0.761 | deleterious | None | None | None | None | I |
I/L | 0.2403 | likely_benign | 0.2493 | benign | -0.794 | Destabilizing | 0.426 | N | 0.483 | neutral | N | 0.495877908 | None | None | I |
I/M | 0.2699 | likely_benign | 0.2817 | benign | -0.733 | Destabilizing | 0.983 | D | 0.605 | neutral | N | 0.502171786 | None | None | I |
I/N | 0.9815 | likely_pathogenic | 0.9824 | pathogenic | -1.169 | Destabilizing | 0.994 | D | 0.769 | deleterious | D | 0.532139325 | None | None | I |
I/P | 0.9948 | likely_pathogenic | 0.9945 | pathogenic | -1.105 | Destabilizing | 0.996 | D | 0.768 | deleterious | None | None | None | None | I |
I/Q | 0.9827 | likely_pathogenic | 0.9823 | pathogenic | -1.241 | Destabilizing | 0.996 | D | 0.78 | deleterious | None | None | None | None | I |
I/R | 0.9804 | likely_pathogenic | 0.9785 | pathogenic | -0.765 | Destabilizing | 0.987 | D | 0.773 | deleterious | None | None | None | None | I |
I/S | 0.9579 | likely_pathogenic | 0.9616 | pathogenic | -1.918 | Destabilizing | 0.983 | D | 0.691 | prob.neutral | N | 0.502260691 | None | None | I |
I/T | 0.9372 | likely_pathogenic | 0.9416 | pathogenic | -1.719 | Destabilizing | 0.892 | D | 0.621 | neutral | N | 0.503866852 | None | None | I |
I/V | 0.0928 | likely_benign | 0.103 | benign | -1.105 | Destabilizing | 0.011 | N | 0.229 | neutral | N | 0.437023359 | None | None | I |
I/W | 0.9769 | likely_pathogenic | 0.9734 | pathogenic | -1.185 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
I/Y | 0.913 | likely_pathogenic | 0.9021 | pathogenic | -0.968 | Destabilizing | 0.987 | D | 0.628 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.