Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24457 | 73594;73595;73596 | chr2:178572763;178572762;178572761 | chr2:179437490;179437489;179437488 |
N2AB | 22816 | 68671;68672;68673 | chr2:178572763;178572762;178572761 | chr2:179437490;179437489;179437488 |
N2A | 21889 | 65890;65891;65892 | chr2:178572763;178572762;178572761 | chr2:179437490;179437489;179437488 |
N2B | 15392 | 46399;46400;46401 | chr2:178572763;178572762;178572761 | chr2:179437490;179437489;179437488 |
Novex-1 | 15517 | 46774;46775;46776 | chr2:178572763;178572762;178572761 | chr2:179437490;179437489;179437488 |
Novex-2 | 15584 | 46975;46976;46977 | chr2:178572763;178572762;178572761 | chr2:179437490;179437489;179437488 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | None | None | 0.018 | N | 0.331 | 0.239 | 0.322510055762 | gnomAD-4.0.0 | 1.59188E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77624E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4551 | ambiguous | 0.4615 | ambiguous | -0.744 | Destabilizing | 0.989 | D | 0.491 | neutral | None | None | None | None | I |
A/D | 0.2522 | likely_benign | 0.254 | benign | -0.721 | Destabilizing | 0.858 | D | 0.571 | neutral | None | None | None | None | I |
A/E | 0.2137 | likely_benign | 0.2193 | benign | -0.879 | Destabilizing | 0.018 | N | 0.331 | neutral | N | 0.434047343 | None | None | I |
A/F | 0.3106 | likely_benign | 0.3095 | benign | -1.117 | Destabilizing | 0.923 | D | 0.645 | neutral | None | None | None | None | I |
A/G | 0.2023 | likely_benign | 0.2136 | benign | -0.587 | Destabilizing | 0.722 | D | 0.455 | neutral | D | 0.53469434 | None | None | I |
A/H | 0.4612 | ambiguous | 0.4735 | ambiguous | -0.683 | Destabilizing | 0.989 | D | 0.651 | neutral | None | None | None | None | I |
A/I | 0.1417 | likely_benign | 0.1474 | benign | -0.527 | Destabilizing | 0.372 | N | 0.481 | neutral | None | None | None | None | I |
A/K | 0.4413 | ambiguous | 0.4645 | ambiguous | -0.827 | Destabilizing | 0.633 | D | 0.45 | neutral | None | None | None | None | I |
A/L | 0.1253 | likely_benign | 0.1262 | benign | -0.527 | Destabilizing | 0.633 | D | 0.489 | neutral | None | None | None | None | I |
A/M | 0.1566 | likely_benign | 0.1629 | benign | -0.411 | Destabilizing | 0.979 | D | 0.508 | neutral | None | None | None | None | I |
A/N | 0.2165 | likely_benign | 0.2253 | benign | -0.417 | Destabilizing | 0.923 | D | 0.621 | neutral | None | None | None | None | I |
A/P | 0.1145 | likely_benign | 0.116 | benign | -0.489 | Destabilizing | 0.949 | D | 0.485 | neutral | N | 0.472509731 | None | None | I |
A/Q | 0.2865 | likely_benign | 0.3 | benign | -0.745 | Destabilizing | 0.858 | D | 0.481 | neutral | None | None | None | None | I |
A/R | 0.454 | ambiguous | 0.4705 | ambiguous | -0.327 | Destabilizing | 0.923 | D | 0.48 | neutral | None | None | None | None | I |
A/S | 0.0906 | likely_benign | 0.0919 | benign | -0.608 | Destabilizing | 0.565 | D | 0.511 | neutral | N | 0.504024716 | None | None | I |
A/T | 0.072 | likely_benign | 0.0721 | benign | -0.695 | Destabilizing | 0.018 | N | 0.277 | neutral | N | 0.403399149 | None | None | I |
A/V | 0.0833 | likely_benign | 0.0844 | benign | -0.489 | Destabilizing | 0.008 | N | 0.279 | neutral | N | 0.496733385 | None | None | I |
A/W | 0.7548 | likely_pathogenic | 0.7588 | pathogenic | -1.24 | Destabilizing | 0.996 | D | 0.703 | prob.neutral | None | None | None | None | I |
A/Y | 0.456 | ambiguous | 0.4685 | ambiguous | -0.911 | Destabilizing | 0.961 | D | 0.645 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.