Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2446 | 7561;7562;7563 | chr2:178773720;178773719;178773718 | chr2:179638447;179638446;179638445 |
N2AB | 2446 | 7561;7562;7563 | chr2:178773720;178773719;178773718 | chr2:179638447;179638446;179638445 |
N2A | 2446 | 7561;7562;7563 | chr2:178773720;178773719;178773718 | chr2:179638447;179638446;179638445 |
N2B | 2400 | 7423;7424;7425 | chr2:178773720;178773719;178773718 | chr2:179638447;179638446;179638445 |
Novex-1 | 2400 | 7423;7424;7425 | chr2:178773720;178773719;178773718 | chr2:179638447;179638446;179638445 |
Novex-2 | 2400 | 7423;7424;7425 | chr2:178773720;178773719;178773718 | chr2:179638447;179638446;179638445 |
Novex-3 | 2446 | 7561;7562;7563 | chr2:178773720;178773719;178773718 | chr2:179638447;179638446;179638445 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.001 | N | 0.264 | 0.081 | 0.225902525712 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1415 | likely_benign | 0.1334 | benign | -0.21 | Destabilizing | 0.001 | N | 0.307 | neutral | N | 0.498196464 | None | None | N |
D/C | 0.6063 | likely_pathogenic | 0.5838 | pathogenic | -0.167 | Destabilizing | 0.944 | D | 0.421 | neutral | None | None | None | None | N |
D/E | 0.1416 | likely_benign | 0.1374 | benign | -0.302 | Destabilizing | 0.002 | N | 0.167 | neutral | N | 0.433439697 | None | None | N |
D/F | 0.6443 | likely_pathogenic | 0.6201 | pathogenic | 0.09 | Stabilizing | 0.818 | D | 0.438 | neutral | None | None | None | None | N |
D/G | 0.1553 | likely_benign | 0.1471 | benign | -0.44 | Destabilizing | 0.09 | N | 0.405 | neutral | N | 0.481664901 | None | None | N |
D/H | 0.277 | likely_benign | 0.2665 | benign | 0.38 | Stabilizing | 0.773 | D | 0.411 | neutral | D | 0.532665891 | None | None | N |
D/I | 0.4306 | ambiguous | 0.3987 | ambiguous | 0.355 | Stabilizing | 0.69 | D | 0.452 | neutral | None | None | None | None | N |
D/K | 0.3621 | ambiguous | 0.3551 | ambiguous | 0.303 | Stabilizing | 0.241 | N | 0.398 | neutral | None | None | None | None | N |
D/L | 0.4318 | ambiguous | 0.408 | ambiguous | 0.355 | Stabilizing | 0.241 | N | 0.398 | neutral | None | None | None | None | N |
D/M | 0.5708 | likely_pathogenic | 0.5388 | ambiguous | 0.308 | Stabilizing | 0.981 | D | 0.418 | neutral | None | None | None | None | N |
D/N | 0.0949 | likely_benign | 0.0904 | benign | -0.236 | Destabilizing | 0.001 | N | 0.264 | neutral | N | 0.496990996 | None | None | N |
D/P | 0.8485 | likely_pathogenic | 0.8336 | pathogenic | 0.189 | Stabilizing | 0.818 | D | 0.389 | neutral | None | None | None | None | N |
D/Q | 0.3087 | likely_benign | 0.2968 | benign | -0.151 | Destabilizing | 0.241 | N | 0.377 | neutral | None | None | None | None | N |
D/R | 0.4038 | ambiguous | 0.3938 | ambiguous | 0.589 | Stabilizing | 0.69 | D | 0.413 | neutral | None | None | None | None | N |
D/S | 0.094 | likely_benign | 0.0899 | benign | -0.313 | Destabilizing | 0.008 | N | 0.201 | neutral | None | None | None | None | N |
D/T | 0.1993 | likely_benign | 0.1876 | benign | -0.121 | Destabilizing | 0.241 | N | 0.393 | neutral | None | None | None | None | N |
D/V | 0.2577 | likely_benign | 0.2402 | benign | 0.189 | Stabilizing | 0.193 | N | 0.397 | neutral | D | 0.532665891 | None | None | N |
D/W | 0.8991 | likely_pathogenic | 0.8911 | pathogenic | 0.268 | Stabilizing | 0.981 | D | 0.509 | neutral | None | None | None | None | N |
D/Y | 0.3209 | likely_benign | 0.303 | benign | 0.342 | Stabilizing | 0.912 | D | 0.438 | neutral | D | 0.53383573 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.