Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24461 | 73606;73607;73608 | chr2:178572751;178572750;178572749 | chr2:179437478;179437477;179437476 |
N2AB | 22820 | 68683;68684;68685 | chr2:178572751;178572750;178572749 | chr2:179437478;179437477;179437476 |
N2A | 21893 | 65902;65903;65904 | chr2:178572751;178572750;178572749 | chr2:179437478;179437477;179437476 |
N2B | 15396 | 46411;46412;46413 | chr2:178572751;178572750;178572749 | chr2:179437478;179437477;179437476 |
Novex-1 | 15521 | 46786;46787;46788 | chr2:178572751;178572750;178572749 | chr2:179437478;179437477;179437476 |
Novex-2 | 15588 | 46987;46988;46989 | chr2:178572751;178572750;178572749 | chr2:179437478;179437477;179437476 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs916071227 | 0.426 | 0.892 | D | 0.556 | 0.297 | 0.33110744837 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
K/E | rs916071227 | 0.426 | 0.892 | D | 0.556 | 0.297 | 0.33110744837 | gnomAD-4.0.0 | 1.02648E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34938E-05 | 0 | 0 |
K/R | None | None | 0.056 | N | 0.483 | 0.088 | 0.284150004643 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77624E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4148 | ambiguous | 0.4356 | ambiguous | -0.173 | Destabilizing | 0.845 | D | 0.609 | neutral | None | None | None | None | I |
K/C | 0.5953 | likely_pathogenic | 0.6138 | pathogenic | -0.476 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | I |
K/D | 0.7503 | likely_pathogenic | 0.7782 | pathogenic | 0.062 | Stabilizing | 0.975 | D | 0.647 | neutral | None | None | None | None | I |
K/E | 0.2558 | likely_benign | 0.2776 | benign | 0.135 | Stabilizing | 0.892 | D | 0.556 | neutral | D | 0.522474404 | None | None | I |
K/F | 0.7655 | likely_pathogenic | 0.7856 | pathogenic | -0.054 | Destabilizing | 0.987 | D | 0.741 | deleterious | None | None | None | None | I |
K/G | 0.641 | likely_pathogenic | 0.6701 | pathogenic | -0.466 | Destabilizing | 0.916 | D | 0.639 | neutral | None | None | None | None | I |
K/H | 0.2372 | likely_benign | 0.2524 | benign | -0.652 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
K/I | 0.2979 | likely_benign | 0.3112 | benign | 0.549 | Stabilizing | 0.975 | D | 0.736 | prob.delet. | None | None | None | None | I |
K/L | 0.3642 | ambiguous | 0.3808 | ambiguous | 0.549 | Stabilizing | 0.845 | D | 0.633 | neutral | None | None | None | None | I |
K/M | 0.241 | likely_benign | 0.2468 | benign | 0.147 | Stabilizing | 0.999 | D | 0.667 | neutral | N | 0.501558993 | None | None | I |
K/N | 0.46 | ambiguous | 0.4875 | ambiguous | -0.22 | Destabilizing | 0.967 | D | 0.587 | neutral | N | 0.512065925 | None | None | I |
K/P | 0.9765 | likely_pathogenic | 0.9772 | pathogenic | 0.338 | Stabilizing | 0.987 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/Q | 0.1261 | likely_benign | 0.133 | benign | -0.27 | Destabilizing | 0.967 | D | 0.586 | neutral | N | 0.499531077 | None | None | I |
K/R | 0.082 | likely_benign | 0.0846 | benign | -0.296 | Destabilizing | 0.056 | N | 0.483 | neutral | N | 0.510374686 | None | None | I |
K/S | 0.4054 | ambiguous | 0.4211 | ambiguous | -0.752 | Destabilizing | 0.845 | D | 0.555 | neutral | None | None | None | None | I |
K/T | 0.1297 | likely_benign | 0.1283 | benign | -0.494 | Destabilizing | 0.056 | N | 0.49 | neutral | N | 0.444515053 | None | None | I |
K/V | 0.2873 | likely_benign | 0.2982 | benign | 0.338 | Stabilizing | 0.95 | D | 0.634 | neutral | None | None | None | None | I |
K/W | 0.7815 | likely_pathogenic | 0.7951 | pathogenic | -0.031 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
K/Y | 0.6519 | likely_pathogenic | 0.6756 | pathogenic | 0.287 | Stabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.