Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24463 | 73612;73613;73614 | chr2:178572745;178572744;178572743 | chr2:179437472;179437471;179437470 |
N2AB | 22822 | 68689;68690;68691 | chr2:178572745;178572744;178572743 | chr2:179437472;179437471;179437470 |
N2A | 21895 | 65908;65909;65910 | chr2:178572745;178572744;178572743 | chr2:179437472;179437471;179437470 |
N2B | 15398 | 46417;46418;46419 | chr2:178572745;178572744;178572743 | chr2:179437472;179437471;179437470 |
Novex-1 | 15523 | 46792;46793;46794 | chr2:178572745;178572744;178572743 | chr2:179437472;179437471;179437470 |
Novex-2 | 15590 | 46993;46994;46995 | chr2:178572745;178572744;178572743 | chr2:179437472;179437471;179437470 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.117 | N | 0.583 | 0.129 | 0.338592109245 | gnomAD-4.0.0 | 2.05294E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69875E-06 | 0 | 0 |
A/V | None | None | 0.062 | N | 0.446 | 0.177 | 0.218845423259 | gnomAD-4.0.0 | 6.84313E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99583E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2682 | likely_benign | 0.279 | benign | -0.685 | Destabilizing | 0.555 | D | 0.503 | neutral | None | None | None | None | I |
A/D | 0.2066 | likely_benign | 0.2262 | benign | -0.882 | Destabilizing | 0.117 | N | 0.583 | neutral | N | 0.45738191 | None | None | I |
A/E | 0.1537 | likely_benign | 0.1559 | benign | -0.805 | Destabilizing | 0.149 | N | 0.527 | neutral | None | None | None | None | I |
A/F | 0.1904 | likely_benign | 0.2033 | benign | -0.607 | Destabilizing | 0.555 | D | 0.632 | neutral | None | None | None | None | I |
A/G | 0.1084 | likely_benign | 0.1173 | benign | -1.114 | Destabilizing | 0.027 | N | 0.457 | neutral | N | 0.376574254 | None | None | I |
A/H | 0.2552 | likely_benign | 0.2724 | benign | -1.378 | Destabilizing | 0.935 | D | 0.622 | neutral | None | None | None | None | I |
A/I | 0.1327 | likely_benign | 0.1376 | benign | 0.188 | Stabilizing | 0.081 | N | 0.566 | neutral | None | None | None | None | I |
A/K | 0.2475 | likely_benign | 0.2544 | benign | -0.871 | Destabilizing | 0.149 | N | 0.53 | neutral | None | None | None | None | I |
A/L | 0.0978 | likely_benign | 0.1022 | benign | 0.188 | Stabilizing | 0.081 | N | 0.517 | neutral | None | None | None | None | I |
A/M | 0.1154 | likely_benign | 0.1163 | benign | 0.063 | Stabilizing | 0.555 | D | 0.564 | neutral | None | None | None | None | I |
A/N | 0.1318 | likely_benign | 0.1426 | benign | -0.761 | Destabilizing | 0.149 | N | 0.583 | neutral | None | None | None | None | I |
A/P | 0.8331 | likely_pathogenic | 0.8279 | pathogenic | -0.075 | Destabilizing | 0.211 | N | 0.563 | neutral | N | 0.45738191 | None | None | I |
A/Q | 0.1793 | likely_benign | 0.1887 | benign | -0.726 | Destabilizing | 0.38 | N | 0.581 | neutral | None | None | None | None | I |
A/R | 0.2353 | likely_benign | 0.2422 | benign | -0.825 | Destabilizing | 0.38 | N | 0.564 | neutral | None | None | None | None | I |
A/S | 0.0683 | likely_benign | 0.0709 | benign | -1.238 | Destabilizing | None | N | 0.182 | neutral | N | 0.302441855 | None | None | I |
A/T | 0.0588 | likely_benign | 0.0584 | benign | -1.033 | Destabilizing | None | N | 0.171 | neutral | N | 0.348616862 | None | None | I |
A/V | 0.088 | likely_benign | 0.0891 | benign | -0.075 | Destabilizing | 0.062 | N | 0.446 | neutral | N | 0.375803463 | None | None | I |
A/W | 0.549 | ambiguous | 0.5855 | pathogenic | -1.13 | Destabilizing | 0.935 | D | 0.661 | neutral | None | None | None | None | I |
A/Y | 0.2885 | likely_benign | 0.3082 | benign | -0.599 | Destabilizing | 0.555 | D | 0.645 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.