Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24477 | 73654;73655;73656 | chr2:178572703;178572702;178572701 | chr2:179437430;179437429;179437428 |
N2AB | 22836 | 68731;68732;68733 | chr2:178572703;178572702;178572701 | chr2:179437430;179437429;179437428 |
N2A | 21909 | 65950;65951;65952 | chr2:178572703;178572702;178572701 | chr2:179437430;179437429;179437428 |
N2B | 15412 | 46459;46460;46461 | chr2:178572703;178572702;178572701 | chr2:179437430;179437429;179437428 |
Novex-1 | 15537 | 46834;46835;46836 | chr2:178572703;178572702;178572701 | chr2:179437430;179437429;179437428 |
Novex-2 | 15604 | 47035;47036;47037 | chr2:178572703;178572702;178572701 | chr2:179437430;179437429;179437428 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.003 | N | 0.473 | 0.142 | 0.436671004673 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.089 | likely_benign | 0.1022 | benign | -0.506 | Destabilizing | 0.285 | N | 0.346 | neutral | D | 0.530536527 | None | None | N |
S/C | 0.1098 | likely_benign | 0.1111 | benign | -0.328 | Destabilizing | 0.987 | D | 0.49 | neutral | N | 0.491822076 | None | None | N |
S/D | 0.4871 | ambiguous | 0.5146 | ambiguous | 0.296 | Stabilizing | 0.39 | N | 0.357 | neutral | None | None | None | None | N |
S/E | 0.57 | likely_pathogenic | 0.6019 | pathogenic | 0.249 | Stabilizing | 0.561 | D | 0.357 | neutral | None | None | None | None | N |
S/F | 0.308 | likely_benign | 0.3875 | ambiguous | -0.835 | Destabilizing | 0.003 | N | 0.473 | neutral | N | 0.488209902 | None | None | N |
S/G | 0.1264 | likely_benign | 0.1367 | benign | -0.698 | Destabilizing | 0.345 | N | 0.343 | neutral | None | None | None | None | N |
S/H | 0.3958 | ambiguous | 0.4086 | ambiguous | -1.166 | Destabilizing | 0.901 | D | 0.499 | neutral | None | None | None | None | N |
S/I | 0.1336 | likely_benign | 0.1537 | benign | -0.119 | Destabilizing | 0.007 | N | 0.403 | neutral | None | None | None | None | N |
S/K | 0.6631 | likely_pathogenic | 0.6983 | pathogenic | -0.518 | Destabilizing | 0.561 | D | 0.354 | neutral | None | None | None | None | N |
S/L | 0.1324 | likely_benign | 0.1582 | benign | -0.119 | Destabilizing | 0.209 | N | 0.568 | neutral | None | None | None | None | N |
S/M | 0.1687 | likely_benign | 0.1884 | benign | 0.046 | Stabilizing | 0.901 | D | 0.502 | neutral | None | None | None | None | N |
S/N | 0.098 | likely_benign | 0.1028 | benign | -0.317 | Destabilizing | 0.017 | N | 0.264 | neutral | None | None | None | None | N |
S/P | 0.6763 | likely_pathogenic | 0.7054 | pathogenic | -0.215 | Destabilizing | 0.954 | D | 0.503 | neutral | N | 0.49482923 | None | None | N |
S/Q | 0.5166 | ambiguous | 0.5354 | ambiguous | -0.489 | Destabilizing | 0.901 | D | 0.471 | neutral | None | None | None | None | N |
S/R | 0.6706 | likely_pathogenic | 0.7082 | pathogenic | -0.395 | Destabilizing | 0.901 | D | 0.497 | neutral | None | None | None | None | N |
S/T | 0.0626 | likely_benign | 0.0654 | benign | -0.407 | Destabilizing | 0.013 | N | 0.255 | neutral | N | 0.399148123 | None | None | N |
S/V | 0.1344 | likely_benign | 0.1515 | benign | -0.215 | Destabilizing | 0.209 | N | 0.561 | neutral | None | None | None | None | N |
S/W | 0.5248 | ambiguous | 0.5783 | pathogenic | -0.817 | Destabilizing | 0.991 | D | 0.591 | neutral | None | None | None | None | N |
S/Y | 0.2375 | likely_benign | 0.2798 | benign | -0.55 | Destabilizing | 0.629 | D | 0.559 | neutral | N | 0.506275588 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.