Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24480 | 73663;73664;73665 | chr2:178572694;178572693;178572692 | chr2:179437421;179437420;179437419 |
N2AB | 22839 | 68740;68741;68742 | chr2:178572694;178572693;178572692 | chr2:179437421;179437420;179437419 |
N2A | 21912 | 65959;65960;65961 | chr2:178572694;178572693;178572692 | chr2:179437421;179437420;179437419 |
N2B | 15415 | 46468;46469;46470 | chr2:178572694;178572693;178572692 | chr2:179437421;179437420;179437419 |
Novex-1 | 15540 | 46843;46844;46845 | chr2:178572694;178572693;178572692 | chr2:179437421;179437420;179437419 |
Novex-2 | 15607 | 47044;47045;47046 | chr2:178572694;178572693;178572692 | chr2:179437421;179437420;179437419 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs775608256 | -0.325 | 1.0 | D | 0.665 | 0.525 | 0.72625753649 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.7908E-04 | None | 0 | None | 0 | 0 | 0 |
S/C | rs775608256 | -0.325 | 1.0 | D | 0.665 | 0.525 | 0.72625753649 | gnomAD-4.0.0 | 3.42166E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.26078E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1565 | likely_benign | 0.1725 | benign | -0.576 | Destabilizing | 0.997 | D | 0.578 | neutral | N | 0.501960159 | None | None | N |
S/C | 0.268 | likely_benign | 0.2875 | benign | -0.361 | Destabilizing | 1.0 | D | 0.665 | neutral | D | 0.523866757 | None | None | N |
S/D | 0.8053 | likely_pathogenic | 0.8441 | pathogenic | 0.627 | Stabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
S/E | 0.8967 | likely_pathogenic | 0.9172 | pathogenic | 0.593 | Stabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
S/F | 0.589 | likely_pathogenic | 0.6608 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.496861732 | None | None | N |
S/G | 0.2122 | likely_benign | 0.2419 | benign | -0.76 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
S/H | 0.732 | likely_pathogenic | 0.77 | pathogenic | -1.096 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
S/I | 0.6053 | likely_pathogenic | 0.6577 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/K | 0.9684 | likely_pathogenic | 0.9772 | pathogenic | -0.31 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
S/L | 0.3016 | likely_benign | 0.3501 | ambiguous | -0.207 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
S/M | 0.4711 | ambiguous | 0.536 | ambiguous | -0.145 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
S/N | 0.435 | ambiguous | 0.4916 | ambiguous | -0.188 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
S/P | 0.9102 | likely_pathogenic | 0.9175 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | D | 0.523359778 | None | None | N |
S/Q | 0.8335 | likely_pathogenic | 0.8613 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
S/R | 0.9462 | likely_pathogenic | 0.9576 | pathogenic | -0.212 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
S/T | 0.1556 | likely_benign | 0.1755 | benign | -0.316 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.514319068 | None | None | N |
S/V | 0.5147 | ambiguous | 0.5646 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
S/W | 0.768 | likely_pathogenic | 0.7846 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
S/Y | 0.5242 | ambiguous | 0.582 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.505142224 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.