Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24496 | 73711;73712;73713 | chr2:178572646;178572645;178572644 | chr2:179437373;179437372;179437371 |
N2AB | 22855 | 68788;68789;68790 | chr2:178572646;178572645;178572644 | chr2:179437373;179437372;179437371 |
N2A | 21928 | 66007;66008;66009 | chr2:178572646;178572645;178572644 | chr2:179437373;179437372;179437371 |
N2B | 15431 | 46516;46517;46518 | chr2:178572646;178572645;178572644 | chr2:179437373;179437372;179437371 |
Novex-1 | 15556 | 46891;46892;46893 | chr2:178572646;178572645;178572644 | chr2:179437373;179437372;179437371 |
Novex-2 | 15623 | 47092;47093;47094 | chr2:178572646;178572645;178572644 | chr2:179437373;179437372;179437371 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1035751709 | None | 0.999 | N | 0.703 | 0.522 | 0.452928561435 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs1035751709 | None | 0.999 | N | 0.703 | 0.522 | 0.452928561435 | gnomAD-4.0.0 | 6.57609E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47076E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9432 | likely_pathogenic | 0.9379 | pathogenic | -1.021 | Destabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | I |
K/C | 0.9413 | likely_pathogenic | 0.9447 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
K/D | 0.973 | likely_pathogenic | 0.9729 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
K/E | 0.859 | likely_pathogenic | 0.8401 | pathogenic | -0.577 | Destabilizing | 0.996 | D | 0.649 | neutral | N | 0.486212989 | None | None | I |
K/F | 0.9863 | likely_pathogenic | 0.9855 | pathogenic | -0.42 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/G | 0.96 | likely_pathogenic | 0.9579 | pathogenic | -1.46 | Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | I |
K/H | 0.665 | likely_pathogenic | 0.6785 | pathogenic | -1.696 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
K/I | 0.8769 | likely_pathogenic | 0.8784 | pathogenic | 0.171 | Stabilizing | 1.0 | D | 0.728 | prob.delet. | D | 0.536638567 | None | None | I |
K/L | 0.869 | likely_pathogenic | 0.8684 | pathogenic | 0.171 | Stabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | I |
K/M | 0.7973 | likely_pathogenic | 0.7975 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
K/N | 0.9164 | likely_pathogenic | 0.9097 | pathogenic | -1.088 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.496710375 | None | None | I |
K/P | 0.9801 | likely_pathogenic | 0.9771 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
K/Q | 0.5149 | ambiguous | 0.4821 | ambiguous | -1.012 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | N | 0.49051863 | None | None | I |
K/R | 0.0929 | likely_benign | 0.0974 | benign | -0.925 | Destabilizing | 0.64 | D | 0.351 | neutral | N | 0.507374453 | None | None | I |
K/S | 0.9406 | likely_pathogenic | 0.9343 | pathogenic | -1.745 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | I |
K/T | 0.7881 | likely_pathogenic | 0.7749 | pathogenic | -1.318 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | N | 0.519322243 | None | None | I |
K/V | 0.8646 | likely_pathogenic | 0.8643 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
K/W | 0.9692 | likely_pathogenic | 0.9696 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
K/Y | 0.9393 | likely_pathogenic | 0.9427 | pathogenic | -0.024 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.