Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24504 | 73735;73736;73737 | chr2:178572622;178572621;178572620 | chr2:179437349;179437348;179437347 |
N2AB | 22863 | 68812;68813;68814 | chr2:178572622;178572621;178572620 | chr2:179437349;179437348;179437347 |
N2A | 21936 | 66031;66032;66033 | chr2:178572622;178572621;178572620 | chr2:179437349;179437348;179437347 |
N2B | 15439 | 46540;46541;46542 | chr2:178572622;178572621;178572620 | chr2:179437349;179437348;179437347 |
Novex-1 | 15564 | 46915;46916;46917 | chr2:178572622;178572621;178572620 | chr2:179437349;179437348;179437347 |
Novex-2 | 15631 | 47116;47117;47118 | chr2:178572622;178572621;178572620 | chr2:179437349;179437348;179437347 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.979 | N | 0.382 | 0.316 | 0.303123707472 | gnomAD-4.0.0 | 1.59252E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43447E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0762 | likely_benign | 0.0693 | benign | -0.226 | Destabilizing | 0.293 | N | 0.229 | neutral | None | None | None | None | I |
S/C | 0.131 | likely_benign | 0.1133 | benign | -0.311 | Destabilizing | 0.999 | D | 0.429 | neutral | N | 0.494587689 | None | None | I |
S/D | 0.3845 | ambiguous | 0.3645 | ambiguous | -0.096 | Destabilizing | 0.984 | D | 0.325 | neutral | None | None | None | None | I |
S/E | 0.4564 | ambiguous | 0.4377 | ambiguous | -0.211 | Destabilizing | 0.984 | D | 0.32 | neutral | None | None | None | None | I |
S/F | 0.2938 | likely_benign | 0.2542 | benign | -1.001 | Destabilizing | 0.995 | D | 0.426 | neutral | None | None | None | None | I |
S/G | 0.0944 | likely_benign | 0.0854 | benign | -0.249 | Destabilizing | 0.959 | D | 0.358 | neutral | N | 0.488458396 | None | None | I |
S/H | 0.3508 | ambiguous | 0.3244 | benign | -0.635 | Destabilizing | 1.0 | D | 0.414 | neutral | None | None | None | None | I |
S/I | 0.1326 | likely_benign | 0.121 | benign | -0.292 | Destabilizing | 0.921 | D | 0.385 | neutral | D | 0.539526944 | None | None | I |
S/K | 0.5549 | ambiguous | 0.5132 | ambiguous | -0.38 | Destabilizing | 0.984 | D | 0.34 | neutral | None | None | None | None | I |
S/L | 0.1049 | likely_benign | 0.0954 | benign | -0.292 | Destabilizing | 0.939 | D | 0.387 | neutral | None | None | None | None | I |
S/M | 0.1926 | likely_benign | 0.1774 | benign | -0.13 | Destabilizing | 0.995 | D | 0.405 | neutral | None | None | None | None | I |
S/N | 0.128 | likely_benign | 0.121 | benign | -0.108 | Destabilizing | 0.979 | D | 0.382 | neutral | N | 0.512340342 | None | None | I |
S/P | 0.1378 | likely_benign | 0.1231 | benign | -0.248 | Destabilizing | 0.088 | N | 0.358 | neutral | None | None | None | None | I |
S/Q | 0.4148 | ambiguous | 0.3967 | ambiguous | -0.359 | Destabilizing | 0.999 | D | 0.341 | neutral | None | None | None | None | I |
S/R | 0.5346 | ambiguous | 0.4836 | ambiguous | -0.149 | Destabilizing | 0.994 | D | 0.396 | neutral | N | 0.487697927 | None | None | I |
S/T | 0.0787 | likely_benign | 0.0738 | benign | -0.226 | Destabilizing | 0.238 | N | 0.373 | neutral | N | 0.512166984 | None | None | I |
S/V | 0.1487 | likely_benign | 0.1362 | benign | -0.248 | Destabilizing | 0.293 | N | 0.345 | neutral | None | None | None | None | I |
S/W | 0.5262 | ambiguous | 0.4737 | ambiguous | -1.078 | Destabilizing | 1.0 | D | 0.523 | neutral | None | None | None | None | I |
S/Y | 0.286 | likely_benign | 0.266 | benign | -0.77 | Destabilizing | 0.999 | D | 0.433 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.