Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24508 | 73747;73748;73749 | chr2:178572610;178572609;178572608 | chr2:179437337;179437336;179437335 |
N2AB | 22867 | 68824;68825;68826 | chr2:178572610;178572609;178572608 | chr2:179437337;179437336;179437335 |
N2A | 21940 | 66043;66044;66045 | chr2:178572610;178572609;178572608 | chr2:179437337;179437336;179437335 |
N2B | 15443 | 46552;46553;46554 | chr2:178572610;178572609;178572608 | chr2:179437337;179437336;179437335 |
Novex-1 | 15568 | 46927;46928;46929 | chr2:178572610;178572609;178572608 | chr2:179437337;179437336;179437335 |
Novex-2 | 15635 | 47128;47129;47130 | chr2:178572610;178572609;178572608 | chr2:179437337;179437336;179437335 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1559416294 | None | 0.944 | N | 0.581 | 0.33 | 0.4897983601 | gnomAD-4.0.0 | 1.59229E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7568 | likely_pathogenic | 0.7047 | pathogenic | 0.021 | Stabilizing | 0.916 | D | 0.613 | neutral | None | None | None | None | I |
K/C | 0.8935 | likely_pathogenic | 0.8694 | pathogenic | -0.28 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
K/D | 0.9726 | likely_pathogenic | 0.9628 | pathogenic | 0.063 | Stabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | I |
K/E | 0.7747 | likely_pathogenic | 0.7196 | pathogenic | 0.048 | Stabilizing | 0.944 | D | 0.607 | neutral | D | 0.528285656 | None | None | I |
K/F | 0.9776 | likely_pathogenic | 0.97 | pathogenic | -0.344 | Destabilizing | 0.975 | D | 0.673 | neutral | None | None | None | None | I |
K/G | 0.9185 | likely_pathogenic | 0.8899 | pathogenic | -0.121 | Destabilizing | 0.987 | D | 0.624 | neutral | None | None | None | None | I |
K/H | 0.703 | likely_pathogenic | 0.6588 | pathogenic | -0.389 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | I |
K/I | 0.8019 | likely_pathogenic | 0.7705 | pathogenic | 0.304 | Stabilizing | 0.95 | D | 0.672 | neutral | None | None | None | None | I |
K/L | 0.8307 | likely_pathogenic | 0.8008 | pathogenic | 0.304 | Stabilizing | 0.653 | D | 0.575 | neutral | None | None | None | None | I |
K/M | 0.7318 | likely_pathogenic | 0.6842 | pathogenic | 0.155 | Stabilizing | 0.63 | D | 0.547 | neutral | N | 0.511838889 | None | None | I |
K/N | 0.9309 | likely_pathogenic | 0.9106 | pathogenic | 0.21 | Stabilizing | 0.983 | D | 0.679 | prob.neutral | N | 0.50217765 | None | None | I |
K/P | 0.9954 | likely_pathogenic | 0.9943 | pathogenic | 0.235 | Stabilizing | 0.996 | D | 0.667 | neutral | None | None | None | None | I |
K/Q | 0.394 | ambiguous | 0.3425 | ambiguous | 0.027 | Stabilizing | 0.983 | D | 0.683 | prob.neutral | N | 0.493428238 | None | None | I |
K/R | 0.1318 | likely_benign | 0.1184 | benign | 0.005 | Stabilizing | 0.944 | D | 0.581 | neutral | N | 0.492213696 | None | None | I |
K/S | 0.8638 | likely_pathogenic | 0.8299 | pathogenic | -0.247 | Destabilizing | 0.916 | D | 0.635 | neutral | None | None | None | None | I |
K/T | 0.6299 | likely_pathogenic | 0.5804 | pathogenic | -0.131 | Destabilizing | 0.967 | D | 0.664 | neutral | N | 0.490403271 | None | None | I |
K/V | 0.6911 | likely_pathogenic | 0.6532 | pathogenic | 0.235 | Stabilizing | 0.845 | D | 0.633 | neutral | None | None | None | None | I |
K/W | 0.984 | likely_pathogenic | 0.9769 | pathogenic | -0.393 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/Y | 0.9502 | likely_pathogenic | 0.9383 | pathogenic | -0.016 | Destabilizing | 0.987 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.