Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24511 | 73756;73757;73758 | chr2:178572601;178572600;178572599 | chr2:179437328;179437327;179437326 |
N2AB | 22870 | 68833;68834;68835 | chr2:178572601;178572600;178572599 | chr2:179437328;179437327;179437326 |
N2A | 21943 | 66052;66053;66054 | chr2:178572601;178572600;178572599 | chr2:179437328;179437327;179437326 |
N2B | 15446 | 46561;46562;46563 | chr2:178572601;178572600;178572599 | chr2:179437328;179437327;179437326 |
Novex-1 | 15571 | 46936;46937;46938 | chr2:178572601;178572600;178572599 | chr2:179437328;179437327;179437326 |
Novex-2 | 15638 | 47137;47138;47139 | chr2:178572601;178572600;178572599 | chr2:179437328;179437327;179437326 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/Y | rs1421171705 | -0.012 | 0.981 | D | 0.615 | 0.198 | 0.538050722575 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
F/Y | rs1421171705 | -0.012 | 0.981 | D | 0.615 | 0.198 | 0.538050722575 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43373E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6123 | likely_pathogenic | 0.6194 | pathogenic | -1.371 | Destabilizing | 0.845 | D | 0.657 | neutral | None | None | None | None | I |
F/C | 0.538 | ambiguous | 0.5528 | ambiguous | -0.51 | Destabilizing | 0.999 | D | 0.769 | deleterious | N | 0.512849166 | None | None | I |
F/D | 0.9374 | likely_pathogenic | 0.9382 | pathogenic | 0.173 | Stabilizing | 0.975 | D | 0.768 | deleterious | None | None | None | None | I |
F/E | 0.9444 | likely_pathogenic | 0.945 | pathogenic | 0.172 | Stabilizing | 0.975 | D | 0.758 | deleterious | None | None | None | None | I |
F/G | 0.8904 | likely_pathogenic | 0.8984 | pathogenic | -1.607 | Destabilizing | 0.845 | D | 0.716 | prob.delet. | None | None | None | None | I |
F/H | 0.714 | likely_pathogenic | 0.746 | pathogenic | -0.038 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
F/I | 0.4073 | ambiguous | 0.4244 | ambiguous | -0.731 | Destabilizing | 0.983 | D | 0.683 | prob.neutral | N | 0.493730953 | None | None | I |
F/K | 0.9521 | likely_pathogenic | 0.9536 | pathogenic | -0.481 | Destabilizing | 0.975 | D | 0.766 | deleterious | None | None | None | None | I |
F/L | 0.9384 | likely_pathogenic | 0.938 | pathogenic | -0.731 | Destabilizing | 0.892 | D | 0.634 | neutral | D | 0.526938861 | None | None | I |
F/M | 0.6091 | likely_pathogenic | 0.6117 | pathogenic | -0.563 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | I |
F/N | 0.731 | likely_pathogenic | 0.7429 | pathogenic | -0.442 | Destabilizing | 0.975 | D | 0.78 | deleterious | None | None | None | None | I |
F/P | 0.988 | likely_pathogenic | 0.9886 | pathogenic | -0.928 | Destabilizing | 0.987 | D | 0.786 | deleterious | None | None | None | None | I |
F/Q | 0.8883 | likely_pathogenic | 0.8917 | pathogenic | -0.534 | Destabilizing | 0.975 | D | 0.785 | deleterious | None | None | None | None | I |
F/R | 0.9158 | likely_pathogenic | 0.9117 | pathogenic | 0.107 | Stabilizing | 0.975 | D | 0.782 | deleterious | None | None | None | None | I |
F/S | 0.4277 | ambiguous | 0.4474 | ambiguous | -1.127 | Destabilizing | 0.204 | N | 0.557 | neutral | N | 0.452958391 | None | None | I |
F/T | 0.3936 | ambiguous | 0.4152 | ambiguous | -1.035 | Destabilizing | 0.845 | D | 0.699 | prob.neutral | None | None | None | None | I |
F/V | 0.3164 | likely_benign | 0.3297 | benign | -0.928 | Destabilizing | 0.892 | D | 0.699 | prob.neutral | N | 0.482374647 | None | None | I |
F/W | 0.6701 | likely_pathogenic | 0.6927 | pathogenic | -0.354 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
F/Y | 0.2509 | likely_benign | 0.284 | benign | -0.423 | Destabilizing | 0.981 | D | 0.615 | neutral | D | 0.530517884 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.