Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24512 | 73759;73760;73761 | chr2:178572598;178572597;178572596 | chr2:179437325;179437324;179437323 |
N2AB | 22871 | 68836;68837;68838 | chr2:178572598;178572597;178572596 | chr2:179437325;179437324;179437323 |
N2A | 21944 | 66055;66056;66057 | chr2:178572598;178572597;178572596 | chr2:179437325;179437324;179437323 |
N2B | 15447 | 46564;46565;46566 | chr2:178572598;178572597;178572596 | chr2:179437325;179437324;179437323 |
Novex-1 | 15572 | 46939;46940;46941 | chr2:178572598;178572597;178572596 | chr2:179437325;179437324;179437323 |
Novex-2 | 15639 | 47140;47141;47142 | chr2:178572598;178572597;178572596 | chr2:179437325;179437324;179437323 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.058 | N | 0.271 | 0.149 | 0.484691182572 | gnomAD-4.0.0 | 6.84378E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99612E-07 | 0 | 0 |
V/L | None | None | 0.489 | D | 0.542 | 0.255 | 0.469496741337 | gnomAD-4.0.0 | 6.84378E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99612E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.894 | likely_pathogenic | 0.8806 | pathogenic | -1.813 | Destabilizing | 0.014 | N | 0.46 | neutral | N | 0.488006507 | None | None | I |
V/C | 0.9197 | likely_pathogenic | 0.9205 | pathogenic | -1.377 | Destabilizing | 0.994 | D | 0.712 | prob.delet. | None | None | None | None | I |
V/D | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -2.435 | Highly Destabilizing | 0.97 | D | 0.807 | deleterious | D | 0.535618364 | None | None | I |
V/E | 0.9964 | likely_pathogenic | 0.9958 | pathogenic | -2.132 | Highly Destabilizing | 0.956 | D | 0.754 | deleterious | None | None | None | None | I |
V/F | 0.8333 | likely_pathogenic | 0.7997 | pathogenic | -0.986 | Destabilizing | 0.97 | D | 0.755 | deleterious | D | 0.529885953 | None | None | I |
V/G | 0.9613 | likely_pathogenic | 0.9556 | pathogenic | -2.432 | Highly Destabilizing | 0.89 | D | 0.783 | deleterious | N | 0.503435552 | None | None | I |
V/H | 0.9978 | likely_pathogenic | 0.9975 | pathogenic | -2.356 | Highly Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | I |
V/I | 0.1086 | likely_benign | 0.0979 | benign | -0.048 | Destabilizing | 0.058 | N | 0.271 | neutral | N | 0.467623986 | None | None | I |
V/K | 0.9967 | likely_pathogenic | 0.996 | pathogenic | -1.451 | Destabilizing | 0.956 | D | 0.76 | deleterious | None | None | None | None | I |
V/L | 0.6894 | likely_pathogenic | 0.6689 | pathogenic | -0.048 | Destabilizing | 0.489 | N | 0.542 | neutral | D | 0.534384909 | None | None | I |
V/M | 0.7763 | likely_pathogenic | 0.7533 | pathogenic | -0.25 | Destabilizing | 0.978 | D | 0.614 | neutral | None | None | None | None | I |
V/N | 0.9944 | likely_pathogenic | 0.9937 | pathogenic | -2.014 | Highly Destabilizing | 0.978 | D | 0.812 | deleterious | None | None | None | None | I |
V/P | 0.9972 | likely_pathogenic | 0.9965 | pathogenic | -0.611 | Destabilizing | 0.978 | D | 0.758 | deleterious | None | None | None | None | I |
V/Q | 0.9927 | likely_pathogenic | 0.9919 | pathogenic | -1.67 | Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | I |
V/R | 0.9908 | likely_pathogenic | 0.9891 | pathogenic | -1.629 | Destabilizing | 0.978 | D | 0.81 | deleterious | None | None | None | None | I |
V/S | 0.9686 | likely_pathogenic | 0.9657 | pathogenic | -2.639 | Highly Destabilizing | 0.915 | D | 0.745 | deleterious | None | None | None | None | I |
V/T | 0.9189 | likely_pathogenic | 0.9115 | pathogenic | -2.158 | Highly Destabilizing | 0.86 | D | 0.617 | neutral | None | None | None | None | I |
V/W | 0.9974 | likely_pathogenic | 0.9964 | pathogenic | -1.535 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | I |
V/Y | 0.9908 | likely_pathogenic | 0.9884 | pathogenic | -1.092 | Destabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.