Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24515 | 73768;73769;73770 | chr2:178572589;178572588;178572587 | chr2:179437316;179437315;179437314 |
N2AB | 22874 | 68845;68846;68847 | chr2:178572589;178572588;178572587 | chr2:179437316;179437315;179437314 |
N2A | 21947 | 66064;66065;66066 | chr2:178572589;178572588;178572587 | chr2:179437316;179437315;179437314 |
N2B | 15450 | 46573;46574;46575 | chr2:178572589;178572588;178572587 | chr2:179437316;179437315;179437314 |
Novex-1 | 15575 | 46948;46949;46950 | chr2:178572589;178572588;178572587 | chr2:179437316;179437315;179437314 |
Novex-2 | 15642 | 47149;47150;47151 | chr2:178572589;178572588;178572587 | chr2:179437316;179437315;179437314 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | rs1470812776 | None | 0.892 | N | 0.617 | 0.328 | 0.492749560936 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/T | rs1470812776 | None | 0.892 | N | 0.617 | 0.328 | 0.492749560936 | gnomAD-4.0.0 | 1.85954E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54322E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8958 | likely_pathogenic | 0.9106 | pathogenic | -0.518 | Destabilizing | 0.916 | D | 0.619 | neutral | None | None | None | None | I |
R/C | 0.4414 | ambiguous | 0.4742 | ambiguous | -0.605 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
R/D | 0.9703 | likely_pathogenic | 0.9723 | pathogenic | 0.067 | Stabilizing | 0.95 | D | 0.586 | neutral | None | None | None | None | I |
R/E | 0.8498 | likely_pathogenic | 0.8627 | pathogenic | 0.191 | Stabilizing | 0.916 | D | 0.605 | neutral | None | None | None | None | I |
R/F | 0.9197 | likely_pathogenic | 0.9351 | pathogenic | -0.385 | Destabilizing | 0.996 | D | 0.718 | prob.delet. | None | None | None | None | I |
R/G | 0.8842 | likely_pathogenic | 0.8987 | pathogenic | -0.81 | Destabilizing | 0.805 | D | 0.603 | neutral | N | 0.511051967 | None | None | I |
R/H | 0.2175 | likely_benign | 0.2555 | benign | -1.099 | Destabilizing | 0.987 | D | 0.64 | neutral | None | None | None | None | I |
R/I | 0.702 | likely_pathogenic | 0.7268 | pathogenic | 0.255 | Stabilizing | 0.983 | D | 0.721 | prob.delet. | N | 0.502139204 | None | None | I |
R/K | 0.1215 | likely_benign | 0.1347 | benign | -0.522 | Destabilizing | 0.773 | D | 0.548 | neutral | N | 0.435239422 | None | None | I |
R/L | 0.6538 | likely_pathogenic | 0.6863 | pathogenic | 0.255 | Stabilizing | 0.987 | D | 0.583 | neutral | None | None | None | None | I |
R/M | 0.6875 | likely_pathogenic | 0.7251 | pathogenic | -0.229 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | I |
R/N | 0.9189 | likely_pathogenic | 0.9332 | pathogenic | -0.188 | Destabilizing | 0.033 | N | 0.378 | neutral | None | None | None | None | I |
R/P | 0.9941 | likely_pathogenic | 0.9939 | pathogenic | 0.019 | Stabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | I |
R/Q | 0.2434 | likely_benign | 0.2687 | benign | -0.279 | Destabilizing | 0.975 | D | 0.635 | neutral | None | None | None | None | I |
R/S | 0.9188 | likely_pathogenic | 0.9323 | pathogenic | -0.847 | Destabilizing | 0.805 | D | 0.636 | neutral | N | 0.493191647 | None | None | I |
R/T | 0.7333 | likely_pathogenic | 0.7706 | pathogenic | -0.544 | Destabilizing | 0.892 | D | 0.617 | neutral | N | 0.495037087 | None | None | I |
R/V | 0.7518 | likely_pathogenic | 0.7757 | pathogenic | 0.019 | Stabilizing | 0.987 | D | 0.713 | prob.delet. | None | None | None | None | I |
R/W | 0.5416 | ambiguous | 0.5815 | pathogenic | -0.151 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | I |
R/Y | 0.8017 | likely_pathogenic | 0.8311 | pathogenic | 0.164 | Stabilizing | 0.996 | D | 0.707 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.