Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24522 | 73789;73790;73791 | chr2:178572568;178572567;178572566 | chr2:179437295;179437294;179437293 |
N2AB | 22881 | 68866;68867;68868 | chr2:178572568;178572567;178572566 | chr2:179437295;179437294;179437293 |
N2A | 21954 | 66085;66086;66087 | chr2:178572568;178572567;178572566 | chr2:179437295;179437294;179437293 |
N2B | 15457 | 46594;46595;46596 | chr2:178572568;178572567;178572566 | chr2:179437295;179437294;179437293 |
Novex-1 | 15582 | 46969;46970;46971 | chr2:178572568;178572567;178572566 | chr2:179437295;179437294;179437293 |
Novex-2 | 15649 | 47170;47171;47172 | chr2:178572568;178572567;178572566 | chr2:179437295;179437294;179437293 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1195696847 | -1.712 | 0.001 | N | 0.449 | 0.167 | 0.212008924253 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/A | rs1195696847 | -1.712 | 0.001 | N | 0.449 | 0.167 | 0.212008924253 | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | N | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/R | None | None | 0.993 | N | 0.836 | 0.447 | 0.551177841964 | gnomAD-4.0.0 | 1.59202E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0769 | likely_benign | 0.0649 | benign | -1.587 | Destabilizing | 0.001 | N | 0.449 | neutral | N | 0.446191842 | None | None | N |
P/C | 0.5049 | ambiguous | 0.4145 | ambiguous | -0.943 | Destabilizing | 0.982 | D | 0.833 | deleterious | None | None | None | None | N |
P/D | 0.8508 | likely_pathogenic | 0.767 | pathogenic | -1.594 | Destabilizing | 0.78 | D | 0.785 | deleterious | None | None | None | None | N |
P/E | 0.5333 | ambiguous | 0.426 | ambiguous | -1.612 | Destabilizing | 0.442 | N | 0.777 | deleterious | None | None | None | None | N |
P/F | 0.6699 | likely_pathogenic | 0.5549 | ambiguous | -1.282 | Destabilizing | 0.994 | D | 0.853 | deleterious | None | None | None | None | N |
P/G | 0.4762 | ambiguous | 0.3857 | ambiguous | -1.892 | Destabilizing | 0.719 | D | 0.768 | deleterious | None | None | None | None | N |
P/H | 0.424 | ambiguous | 0.3143 | benign | -1.438 | Destabilizing | 0.998 | D | 0.822 | deleterious | D | 0.525876268 | None | None | N |
P/I | 0.4341 | ambiguous | 0.3315 | benign | -0.847 | Destabilizing | 0.989 | D | 0.829 | deleterious | None | None | None | None | N |
P/K | 0.4892 | ambiguous | 0.3695 | ambiguous | -1.31 | Destabilizing | 0.962 | D | 0.779 | deleterious | None | None | None | None | N |
P/L | 0.2314 | likely_benign | 0.1685 | benign | -0.847 | Destabilizing | 0.95 | D | 0.809 | deleterious | N | 0.517228988 | None | None | N |
P/M | 0.391 | ambiguous | 0.3092 | benign | -0.552 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
P/N | 0.6207 | likely_pathogenic | 0.5112 | ambiguous | -1.033 | Destabilizing | 0.957 | D | 0.839 | deleterious | None | None | None | None | N |
P/Q | 0.2994 | likely_benign | 0.2009 | benign | -1.255 | Destabilizing | 0.985 | D | 0.771 | deleterious | None | None | None | None | N |
P/R | 0.3936 | ambiguous | 0.2686 | benign | -0.728 | Destabilizing | 0.993 | D | 0.836 | deleterious | N | 0.501478136 | None | None | N |
P/S | 0.1987 | likely_benign | 0.1454 | benign | -1.514 | Destabilizing | 0.727 | D | 0.745 | deleterious | N | 0.487386352 | None | None | N |
P/T | 0.2352 | likely_benign | 0.161 | benign | -1.434 | Destabilizing | 0.703 | D | 0.759 | deleterious | N | 0.51359491 | None | None | N |
P/V | 0.2984 | likely_benign | 0.2243 | benign | -1.06 | Destabilizing | 0.689 | D | 0.785 | deleterious | None | None | None | None | N |
P/W | 0.8777 | likely_pathogenic | 0.7889 | pathogenic | -1.46 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
P/Y | 0.6688 | likely_pathogenic | 0.5606 | ambiguous | -1.203 | Destabilizing | 0.998 | D | 0.854 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.