Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24531 | 73816;73817;73818 | chr2:178572541;178572540;178572539 | chr2:179437268;179437267;179437266 |
N2AB | 22890 | 68893;68894;68895 | chr2:178572541;178572540;178572539 | chr2:179437268;179437267;179437266 |
N2A | 21963 | 66112;66113;66114 | chr2:178572541;178572540;178572539 | chr2:179437268;179437267;179437266 |
N2B | 15466 | 46621;46622;46623 | chr2:178572541;178572540;178572539 | chr2:179437268;179437267;179437266 |
Novex-1 | 15591 | 46996;46997;46998 | chr2:178572541;178572540;178572539 | chr2:179437268;179437267;179437266 |
Novex-2 | 15658 | 47197;47198;47199 | chr2:178572541;178572540;178572539 | chr2:179437268;179437267;179437266 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.688 | D | 0.701 | 0.469 | 0.858470133663 | gnomAD-4.0.0 | 1.59203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77855E-05 | None | 0 | 0 | 0 | 0 | 0 |
V/F | None | None | 0.45 | N | 0.55 | 0.341 | 0.722108883045 | gnomAD-4.0.0 | 2.05306E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69877E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4456 | ambiguous | 0.3243 | benign | -1.029 | Destabilizing | 0.049 | N | 0.491 | neutral | N | 0.477715568 | None | None | N |
V/C | 0.8278 | likely_pathogenic | 0.7724 | pathogenic | -1.107 | Destabilizing | 0.932 | D | 0.542 | neutral | None | None | None | None | N |
V/D | 0.9063 | likely_pathogenic | 0.7895 | pathogenic | -0.587 | Destabilizing | 0.688 | D | 0.701 | prob.neutral | D | 0.523736674 | None | None | N |
V/E | 0.7866 | likely_pathogenic | 0.658 | pathogenic | -0.641 | Destabilizing | 0.321 | N | 0.647 | neutral | None | None | None | None | N |
V/F | 0.4482 | ambiguous | 0.3291 | benign | -1.158 | Destabilizing | 0.45 | N | 0.55 | neutral | N | 0.494556057 | None | None | N |
V/G | 0.606 | likely_pathogenic | 0.4408 | ambiguous | -1.236 | Destabilizing | 0.749 | D | 0.682 | prob.neutral | N | 0.516356841 | None | None | N |
V/H | 0.9165 | likely_pathogenic | 0.8546 | pathogenic | -0.855 | Destabilizing | 0.948 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/I | 0.0639 | likely_benign | 0.0659 | benign | -0.593 | Destabilizing | None | N | 0.14 | neutral | N | 0.453776749 | None | None | N |
V/K | 0.8189 | likely_pathogenic | 0.7114 | pathogenic | -0.616 | Destabilizing | 0.508 | D | 0.655 | neutral | None | None | None | None | N |
V/L | 0.4013 | ambiguous | 0.3033 | benign | -0.593 | Destabilizing | 0.001 | N | 0.303 | neutral | N | 0.471599502 | None | None | N |
V/M | 0.2323 | likely_benign | 0.1819 | benign | -0.594 | Destabilizing | 0.437 | N | 0.477 | neutral | None | None | None | None | N |
V/N | 0.7084 | likely_pathogenic | 0.564 | pathogenic | -0.438 | Destabilizing | 0.318 | N | 0.709 | prob.delet. | None | None | None | None | N |
V/P | 0.9307 | likely_pathogenic | 0.8797 | pathogenic | -0.704 | Destabilizing | 0.318 | N | 0.651 | neutral | None | None | None | None | N |
V/Q | 0.7405 | likely_pathogenic | 0.6359 | pathogenic | -0.679 | Destabilizing | 0.69 | D | 0.662 | neutral | None | None | None | None | N |
V/R | 0.8143 | likely_pathogenic | 0.6911 | pathogenic | -0.213 | Destabilizing | 0.688 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/S | 0.5778 | likely_pathogenic | 0.4454 | ambiguous | -0.956 | Destabilizing | 0.543 | D | 0.557 | neutral | None | None | None | None | N |
V/T | 0.3501 | ambiguous | 0.2926 | benign | -0.902 | Destabilizing | 0.063 | N | 0.449 | neutral | None | None | None | None | N |
V/W | 0.959 | likely_pathogenic | 0.917 | pathogenic | -1.217 | Destabilizing | 0.985 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/Y | 0.8322 | likely_pathogenic | 0.7259 | pathogenic | -0.873 | Destabilizing | 0.688 | D | 0.554 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.