Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2453873837;73838;73839 chr2:178572520;178572519;178572518chr2:179437247;179437246;179437245
N2AB2289768914;68915;68916 chr2:178572520;178572519;178572518chr2:179437247;179437246;179437245
N2A2197066133;66134;66135 chr2:178572520;178572519;178572518chr2:179437247;179437246;179437245
N2B1547346642;46643;46644 chr2:178572520;178572519;178572518chr2:179437247;179437246;179437245
Novex-11559847017;47018;47019 chr2:178572520;178572519;178572518chr2:179437247;179437246;179437245
Novex-21566547218;47219;47220 chr2:178572520;178572519;178572518chr2:179437247;179437246;179437245
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Fn3-66
  • Domain position: 20
  • Structural Position: 22
  • Q(SASA): 0.1121
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P None None 1.0 D 0.93 0.721 0.799372495493 gnomAD-4.0.0 2.40064E-06 None None None None N None 0 0 None 0 0 None 0 0 2.625E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.9436 likely_pathogenic 0.9248 pathogenic -2.677 Highly Destabilizing 0.998 D 0.711 prob.delet. None None None None N
L/C 0.9231 likely_pathogenic 0.9044 pathogenic -1.735 Destabilizing 1.0 D 0.812 deleterious None None None None N
L/D 0.9999 likely_pathogenic 0.9998 pathogenic -3.3 Highly Destabilizing 1.0 D 0.929 deleterious None None None None N
L/E 0.9987 likely_pathogenic 0.9984 pathogenic -2.959 Highly Destabilizing 1.0 D 0.916 deleterious None None None None N
L/F 0.7638 likely_pathogenic 0.6788 pathogenic -1.606 Destabilizing 0.998 D 0.728 prob.delet. D 0.564008379 None None N
L/G 0.9963 likely_pathogenic 0.9947 pathogenic -3.309 Highly Destabilizing 1.0 D 0.913 deleterious None None None None N
L/H 0.9973 likely_pathogenic 0.996 pathogenic -3.1 Highly Destabilizing 1.0 D 0.904 deleterious D 0.565275826 None None N
L/I 0.0823 likely_benign 0.0839 benign -0.772 Destabilizing 0.147 N 0.339 neutral N 0.494842299 None None N
L/K 0.9977 likely_pathogenic 0.9974 pathogenic -2.023 Highly Destabilizing 1.0 D 0.889 deleterious None None None None N
L/M 0.309 likely_benign 0.2698 benign -0.896 Destabilizing 0.994 D 0.705 prob.neutral None None None None N
L/N 0.9988 likely_pathogenic 0.9983 pathogenic -2.779 Highly Destabilizing 1.0 D 0.932 deleterious None None None None N
L/P 0.9981 likely_pathogenic 0.9977 pathogenic -1.398 Destabilizing 1.0 D 0.93 deleterious D 0.565275826 None None N
L/Q 0.9952 likely_pathogenic 0.9935 pathogenic -2.367 Highly Destabilizing 1.0 D 0.919 deleterious None None None None N
L/R 0.9958 likely_pathogenic 0.9948 pathogenic -2.188 Highly Destabilizing 1.0 D 0.909 deleterious D 0.565275826 None None N
L/S 0.9964 likely_pathogenic 0.9944 pathogenic -3.324 Highly Destabilizing 1.0 D 0.891 deleterious None None None None N
L/T 0.9752 likely_pathogenic 0.9683 pathogenic -2.809 Highly Destabilizing 1.0 D 0.763 deleterious None None None None N
L/V 0.1072 likely_benign 0.1065 benign -1.398 Destabilizing 0.69 D 0.629 neutral D 0.524660987 None None N
L/W 0.9912 likely_pathogenic 0.9842 pathogenic -2.017 Highly Destabilizing 1.0 D 0.855 deleterious None None None None N
L/Y 0.989 likely_pathogenic 0.9825 pathogenic -1.786 Destabilizing 1.0 D 0.808 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.