Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24539 | 73840;73841;73842 | chr2:178572517;178572516;178572515 | chr2:179437244;179437243;179437242 |
N2AB | 22898 | 68917;68918;68919 | chr2:178572517;178572516;178572515 | chr2:179437244;179437243;179437242 |
N2A | 21971 | 66136;66137;66138 | chr2:178572517;178572516;178572515 | chr2:179437244;179437243;179437242 |
N2B | 15474 | 46645;46646;46647 | chr2:178572517;178572516;178572515 | chr2:179437244;179437243;179437242 |
Novex-1 | 15599 | 47020;47021;47022 | chr2:178572517;178572516;178572515 | chr2:179437244;179437243;179437242 |
Novex-2 | 15666 | 47221;47222;47223 | chr2:178572517;178572516;178572515 | chr2:179437244;179437243;179437242 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs890303676 | -0.664 | 0.989 | D | 0.532 | 0.327 | 0.346544149963 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/R | rs890303676 | -0.664 | 0.989 | D | 0.532 | 0.327 | 0.346544149963 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/R | rs890303676 | -0.664 | 0.989 | D | 0.532 | 0.327 | 0.346544149963 | gnomAD-4.0.0 | 3.84515E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18202E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0792 | likely_benign | 0.0784 | benign | -1.199 | Destabilizing | 0.123 | N | 0.292 | neutral | N | 0.484638374 | None | None | N |
T/C | 0.1968 | likely_benign | 0.2046 | benign | -0.899 | Destabilizing | 0.999 | D | 0.546 | neutral | None | None | None | None | N |
T/D | 0.5662 | likely_pathogenic | 0.5096 | ambiguous | -1.401 | Destabilizing | 0.734 | D | 0.475 | neutral | None | None | None | None | N |
T/E | 0.4462 | ambiguous | 0.4051 | ambiguous | -1.236 | Destabilizing | 0.902 | D | 0.469 | neutral | None | None | None | None | N |
T/F | 0.1501 | likely_benign | 0.1439 | benign | -0.903 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | N |
T/G | 0.186 | likely_benign | 0.1838 | benign | -1.589 | Destabilizing | 0.921 | D | 0.509 | neutral | None | None | None | None | N |
T/H | 0.2151 | likely_benign | 0.2105 | benign | -1.714 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
T/I | 0.101 | likely_benign | 0.0999 | benign | -0.188 | Destabilizing | 0.115 | N | 0.396 | neutral | N | 0.468725893 | None | None | N |
T/K | 0.349 | ambiguous | 0.3246 | benign | -0.665 | Destabilizing | 0.907 | D | 0.464 | neutral | D | 0.523887408 | None | None | N |
T/L | 0.0668 | likely_benign | 0.0667 | benign | -0.188 | Destabilizing | 0.727 | D | 0.427 | neutral | None | None | None | None | N |
T/M | 0.07 | likely_benign | 0.0728 | benign | -0.131 | Destabilizing | 0.989 | D | 0.55 | neutral | None | None | None | None | N |
T/N | 0.1263 | likely_benign | 0.1233 | benign | -1.22 | Destabilizing | 0.734 | D | 0.456 | neutral | None | None | None | None | N |
T/P | 0.7916 | likely_pathogenic | 0.7211 | pathogenic | -0.494 | Destabilizing | 0.937 | D | 0.535 | neutral | D | 0.526330341 | None | None | N |
T/Q | 0.2319 | likely_benign | 0.2272 | benign | -1.099 | Destabilizing | 0.955 | D | 0.531 | neutral | None | None | None | None | N |
T/R | 0.2952 | likely_benign | 0.2588 | benign | -0.755 | Destabilizing | 0.989 | D | 0.532 | neutral | D | 0.523367333 | None | None | N |
T/S | 0.0798 | likely_benign | 0.0799 | benign | -1.457 | Destabilizing | 0.004 | N | 0.174 | neutral | N | 0.424392418 | None | None | N |
T/V | 0.0868 | likely_benign | 0.0895 | benign | -0.494 | Destabilizing | 0.049 | N | 0.161 | neutral | None | None | None | None | N |
T/W | 0.5195 | ambiguous | 0.5003 | ambiguous | -0.993 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
T/Y | 0.2193 | likely_benign | 0.2117 | benign | -0.646 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.