Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2454 | 7585;7586;7587 | chr2:178773696;178773695;178773694 | chr2:179638423;179638422;179638421 |
N2AB | 2454 | 7585;7586;7587 | chr2:178773696;178773695;178773694 | chr2:179638423;179638422;179638421 |
N2A | 2454 | 7585;7586;7587 | chr2:178773696;178773695;178773694 | chr2:179638423;179638422;179638421 |
N2B | 2408 | 7447;7448;7449 | chr2:178773696;178773695;178773694 | chr2:179638423;179638422;179638421 |
Novex-1 | 2408 | 7447;7448;7449 | chr2:178773696;178773695;178773694 | chr2:179638423;179638422;179638421 |
Novex-2 | 2408 | 7447;7448;7449 | chr2:178773696;178773695;178773694 | chr2:179638423;179638422;179638421 |
Novex-3 | 2454 | 7585;7586;7587 | chr2:178773696;178773695;178773694 | chr2:179638423;179638422;179638421 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs2091855424 | None | 0.81 | D | 0.559 | 0.752 | 0.86537904985 | gnomAD-4.0.0 | 1.59073E-06 | None | None | None | None | N | None | 5.65291E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1944 | likely_benign | 0.1929 | benign | -1.204 | Destabilizing | 0.334 | N | 0.415 | neutral | N | 0.514408311 | None | None | N |
V/C | 0.6567 | likely_pathogenic | 0.6511 | pathogenic | -0.847 | Destabilizing | 0.992 | D | 0.445 | neutral | None | None | None | None | N |
V/D | 0.3971 | ambiguous | 0.3911 | ambiguous | -0.918 | Destabilizing | 0.81 | D | 0.559 | neutral | D | 0.70273508 | None | None | N |
V/E | 0.3128 | likely_benign | 0.3068 | benign | -0.976 | Destabilizing | 0.739 | D | 0.472 | neutral | None | None | None | None | N |
V/F | 0.1728 | likely_benign | 0.1724 | benign | -1.179 | Destabilizing | 0.81 | D | 0.431 | neutral | D | 0.701238865 | None | None | N |
V/G | 0.2686 | likely_benign | 0.2635 | benign | -1.456 | Destabilizing | 0.896 | D | 0.519 | neutral | D | 0.70204869 | None | None | N |
V/H | 0.5454 | ambiguous | 0.5406 | ambiguous | -1.066 | Destabilizing | 0.977 | D | 0.585 | neutral | None | None | None | None | N |
V/I | 0.0719 | likely_benign | 0.0704 | benign | -0.644 | Destabilizing | 0.004 | N | 0.128 | neutral | D | 0.538856829 | None | None | N |
V/K | 0.3222 | likely_benign | 0.325 | benign | -0.94 | Destabilizing | 0.739 | D | 0.468 | neutral | None | None | None | None | N |
V/L | 0.1915 | likely_benign | 0.1881 | benign | -0.644 | Destabilizing | 0.002 | N | 0.117 | neutral | N | 0.505521444 | None | None | N |
V/M | 0.1144 | likely_benign | 0.11 | benign | -0.456 | Destabilizing | 0.85 | D | 0.403 | neutral | None | None | None | None | N |
V/N | 0.2575 | likely_benign | 0.253 | benign | -0.641 | Destabilizing | 0.92 | D | 0.581 | neutral | None | None | None | None | N |
V/P | 0.9026 | likely_pathogenic | 0.9065 | pathogenic | -0.795 | Destabilizing | 0.972 | D | 0.529 | neutral | None | None | None | None | N |
V/Q | 0.2987 | likely_benign | 0.2923 | benign | -0.875 | Destabilizing | 0.25 | N | 0.399 | neutral | None | None | None | None | N |
V/R | 0.3018 | likely_benign | 0.3089 | benign | -0.413 | Destabilizing | 0.85 | D | 0.571 | neutral | None | None | None | None | N |
V/S | 0.2345 | likely_benign | 0.2319 | benign | -1.111 | Destabilizing | 0.85 | D | 0.475 | neutral | None | None | None | None | N |
V/T | 0.16 | likely_benign | 0.1584 | benign | -1.06 | Destabilizing | 0.617 | D | 0.38 | neutral | None | None | None | None | N |
V/W | 0.793 | likely_pathogenic | 0.7939 | pathogenic | -1.298 | Destabilizing | 0.992 | D | 0.665 | neutral | None | None | None | None | N |
V/Y | 0.5115 | ambiguous | 0.5149 | ambiguous | -1.002 | Destabilizing | 0.92 | D | 0.448 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.