Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2454973870;73871;73872 chr2:178572487;178572486;178572485chr2:179437214;179437213;179437212
N2AB2290868947;68948;68949 chr2:178572487;178572486;178572485chr2:179437214;179437213;179437212
N2A2198166166;66167;66168 chr2:178572487;178572486;178572485chr2:179437214;179437213;179437212
N2B1548446675;46676;46677 chr2:178572487;178572486;178572485chr2:179437214;179437213;179437212
Novex-11560947050;47051;47052 chr2:178572487;178572486;178572485chr2:179437214;179437213;179437212
Novex-21567647251;47252;47253 chr2:178572487;178572486;178572485chr2:179437214;179437213;179437212
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: TCA
  • RefSeq wild type template codon: AGT
  • Domain: Fn3-66
  • Domain position: 31
  • Structural Position: 33
  • Q(SASA): 0.1214
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/T None None 0.991 N 0.632 0.244 0.289474373501 gnomAD-4.0.0 1.20032E-06 None None None None I None 6.33473E-05 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0853 likely_benign 0.0807 benign -0.791 Destabilizing 0.965 D 0.62 neutral N 0.464263102 None None I
S/C 0.0963 likely_benign 0.0886 benign -0.52 Destabilizing 1.0 D 0.812 deleterious None None None None I
S/D 0.897 likely_pathogenic 0.8356 pathogenic -0.569 Destabilizing 0.999 D 0.738 prob.delet. None None None None I
S/E 0.9183 likely_pathogenic 0.8743 pathogenic -0.553 Destabilizing 0.999 D 0.709 prob.delet. None None None None I
S/F 0.5817 likely_pathogenic 0.4454 ambiguous -0.903 Destabilizing 1.0 D 0.834 deleterious None None None None I
S/G 0.2044 likely_benign 0.1661 benign -1.062 Destabilizing 1.0 D 0.614 neutral None None None None I
S/H 0.7901 likely_pathogenic 0.6823 pathogenic -1.516 Destabilizing 1.0 D 0.821 deleterious None None None None I
S/I 0.5963 likely_pathogenic 0.4489 ambiguous -0.171 Destabilizing 1.0 D 0.829 deleterious None None None None I
S/K 0.9761 likely_pathogenic 0.9511 pathogenic -0.78 Destabilizing 1.0 D 0.727 prob.delet. None None None None I
S/L 0.2268 likely_benign 0.1802 benign -0.171 Destabilizing 1.0 D 0.807 deleterious N 0.486425301 None None I
S/M 0.3759 ambiguous 0.3158 benign 0.19 Stabilizing 1.0 D 0.819 deleterious None None None None I
S/N 0.5126 ambiguous 0.4145 ambiguous -0.812 Destabilizing 0.993 D 0.721 prob.delet. None None None None I
S/P 0.9901 likely_pathogenic 0.9758 pathogenic -0.344 Destabilizing 1.0 D 0.827 deleterious D 0.524786631 None None I
S/Q 0.8437 likely_pathogenic 0.7757 pathogenic -0.954 Destabilizing 1.0 D 0.823 deleterious None None None None I
S/R 0.9599 likely_pathogenic 0.9198 pathogenic -0.676 Destabilizing 1.0 D 0.823 deleterious None None None None I
S/T 0.217 likely_benign 0.1784 benign -0.785 Destabilizing 0.991 D 0.632 neutral N 0.46887725 None None I
S/V 0.4227 ambiguous 0.3126 benign -0.344 Destabilizing 1.0 D 0.824 deleterious None None None None I
S/W 0.7978 likely_pathogenic 0.6461 pathogenic -0.893 Destabilizing 1.0 D 0.813 deleterious None None None None I
S/Y 0.5929 likely_pathogenic 0.4558 ambiguous -0.629 Destabilizing 1.0 D 0.84 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.