Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24549 | 73870;73871;73872 | chr2:178572487;178572486;178572485 | chr2:179437214;179437213;179437212 |
N2AB | 22908 | 68947;68948;68949 | chr2:178572487;178572486;178572485 | chr2:179437214;179437213;179437212 |
N2A | 21981 | 66166;66167;66168 | chr2:178572487;178572486;178572485 | chr2:179437214;179437213;179437212 |
N2B | 15484 | 46675;46676;46677 | chr2:178572487;178572486;178572485 | chr2:179437214;179437213;179437212 |
Novex-1 | 15609 | 47050;47051;47052 | chr2:178572487;178572486;178572485 | chr2:179437214;179437213;179437212 |
Novex-2 | 15676 | 47251;47252;47253 | chr2:178572487;178572486;178572485 | chr2:179437214;179437213;179437212 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.991 | N | 0.632 | 0.244 | 0.289474373501 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0853 | likely_benign | 0.0807 | benign | -0.791 | Destabilizing | 0.965 | D | 0.62 | neutral | N | 0.464263102 | None | None | I |
S/C | 0.0963 | likely_benign | 0.0886 | benign | -0.52 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
S/D | 0.897 | likely_pathogenic | 0.8356 | pathogenic | -0.569 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | I |
S/E | 0.9183 | likely_pathogenic | 0.8743 | pathogenic | -0.553 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
S/F | 0.5817 | likely_pathogenic | 0.4454 | ambiguous | -0.903 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
S/G | 0.2044 | likely_benign | 0.1661 | benign | -1.062 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
S/H | 0.7901 | likely_pathogenic | 0.6823 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
S/I | 0.5963 | likely_pathogenic | 0.4489 | ambiguous | -0.171 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
S/K | 0.9761 | likely_pathogenic | 0.9511 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
S/L | 0.2268 | likely_benign | 0.1802 | benign | -0.171 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.486425301 | None | None | I |
S/M | 0.3759 | ambiguous | 0.3158 | benign | 0.19 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
S/N | 0.5126 | ambiguous | 0.4145 | ambiguous | -0.812 | Destabilizing | 0.993 | D | 0.721 | prob.delet. | None | None | None | None | I |
S/P | 0.9901 | likely_pathogenic | 0.9758 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.524786631 | None | None | I |
S/Q | 0.8437 | likely_pathogenic | 0.7757 | pathogenic | -0.954 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
S/R | 0.9599 | likely_pathogenic | 0.9198 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
S/T | 0.217 | likely_benign | 0.1784 | benign | -0.785 | Destabilizing | 0.991 | D | 0.632 | neutral | N | 0.46887725 | None | None | I |
S/V | 0.4227 | ambiguous | 0.3126 | benign | -0.344 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
S/W | 0.7978 | likely_pathogenic | 0.6461 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
S/Y | 0.5929 | likely_pathogenic | 0.4558 | ambiguous | -0.629 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.