Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24550 | 73873;73874;73875 | chr2:178572484;178572483;178572482 | chr2:179437211;179437210;179437209 |
N2AB | 22909 | 68950;68951;68952 | chr2:178572484;178572483;178572482 | chr2:179437211;179437210;179437209 |
N2A | 21982 | 66169;66170;66171 | chr2:178572484;178572483;178572482 | chr2:179437211;179437210;179437209 |
N2B | 15485 | 46678;46679;46680 | chr2:178572484;178572483;178572482 | chr2:179437211;179437210;179437209 |
Novex-1 | 15610 | 47053;47054;47055 | chr2:178572484;178572483;178572482 | chr2:179437211;179437210;179437209 |
Novex-2 | 15677 | 47254;47255;47256 | chr2:178572484;178572483;178572482 | chr2:179437211;179437210;179437209 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1323106581 | None | 0.002 | N | 0.143 | 0.184 | 0.223847106136 | gnomAD-4.0.0 | 1.36906E-06 | None | None | None | None | I | None | 0 | 2.23774E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65722E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7295 | likely_pathogenic | 0.6174 | pathogenic | -0.048 | Destabilizing | 0.757 | D | 0.543 | neutral | None | None | None | None | I |
K/C | 0.8818 | likely_pathogenic | 0.83 | pathogenic | -0.18 | Destabilizing | 0.996 | D | 0.688 | prob.neutral | None | None | None | None | I |
K/D | 0.9294 | likely_pathogenic | 0.8855 | pathogenic | 0.107 | Stabilizing | 0.609 | D | 0.569 | neutral | None | None | None | None | I |
K/E | 0.708 | likely_pathogenic | 0.5677 | pathogenic | 0.132 | Stabilizing | 0.002 | N | 0.143 | neutral | N | 0.455024756 | None | None | I |
K/F | 0.9695 | likely_pathogenic | 0.9511 | pathogenic | -0.135 | Destabilizing | 0.964 | D | 0.657 | neutral | None | None | None | None | I |
K/G | 0.8604 | likely_pathogenic | 0.7703 | pathogenic | -0.286 | Destabilizing | 0.757 | D | 0.603 | neutral | None | None | None | None | I |
K/H | 0.5845 | likely_pathogenic | 0.4867 | ambiguous | -0.567 | Destabilizing | 0.902 | D | 0.572 | neutral | None | None | None | None | I |
K/I | 0.7726 | likely_pathogenic | 0.7012 | pathogenic | 0.508 | Stabilizing | 0.329 | N | 0.664 | neutral | N | 0.519289665 | None | None | I |
K/L | 0.76 | likely_pathogenic | 0.6758 | pathogenic | 0.508 | Stabilizing | 0.084 | N | 0.587 | neutral | None | None | None | None | I |
K/M | 0.7071 | likely_pathogenic | 0.6095 | pathogenic | 0.287 | Stabilizing | 0.968 | D | 0.568 | neutral | None | None | None | None | I |
K/N | 0.8738 | likely_pathogenic | 0.8117 | pathogenic | 0.197 | Stabilizing | 0.701 | D | 0.485 | neutral | N | 0.517422796 | None | None | I |
K/P | 0.7058 | likely_pathogenic | 0.6132 | pathogenic | 0.352 | Stabilizing | 0.957 | D | 0.584 | neutral | None | None | None | None | I |
K/Q | 0.3838 | ambiguous | 0.3009 | benign | 0.038 | Stabilizing | 0.125 | N | 0.536 | neutral | N | 0.518692232 | None | None | I |
K/R | 0.0786 | likely_benign | 0.0732 | benign | -0.093 | Destabilizing | 0.001 | N | 0.081 | neutral | N | 0.464975178 | None | None | I |
K/S | 0.8604 | likely_pathogenic | 0.7801 | pathogenic | -0.324 | Destabilizing | 0.757 | D | 0.504 | neutral | None | None | None | None | I |
K/T | 0.6548 | likely_pathogenic | 0.5432 | ambiguous | -0.137 | Destabilizing | 0.413 | N | 0.577 | neutral | N | 0.508552597 | None | None | I |
K/V | 0.6778 | likely_pathogenic | 0.5911 | pathogenic | 0.352 | Stabilizing | 0.461 | N | 0.555 | neutral | None | None | None | None | I |
K/W | 0.946 | likely_pathogenic | 0.9165 | pathogenic | -0.117 | Destabilizing | 0.997 | D | 0.731 | prob.delet. | None | None | None | None | I |
K/Y | 0.9116 | likely_pathogenic | 0.8766 | pathogenic | 0.217 | Stabilizing | 0.758 | D | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.