Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24551 | 73876;73877;73878 | chr2:178572481;178572480;178572479 | chr2:179437208;179437207;179437206 |
N2AB | 22910 | 68953;68954;68955 | chr2:178572481;178572480;178572479 | chr2:179437208;179437207;179437206 |
N2A | 21983 | 66172;66173;66174 | chr2:178572481;178572480;178572479 | chr2:179437208;179437207;179437206 |
N2B | 15486 | 46681;46682;46683 | chr2:178572481;178572480;178572479 | chr2:179437208;179437207;179437206 |
Novex-1 | 15611 | 47056;47057;47058 | chr2:178572481;178572480;178572479 | chr2:179437208;179437207;179437206 |
Novex-2 | 15678 | 47257;47258;47259 | chr2:178572481;178572480;178572479 | chr2:179437208;179437207;179437206 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs879246805 | -1.647 | 0.05 | N | 0.257 | 0.098 | None | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | I | None | 2.06765E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs879246805 | -1.647 | 0.05 | N | 0.257 | 0.098 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs879246805 | -1.647 | 0.05 | N | 0.257 | 0.098 | None | gnomAD-4.0.0 | 8.97714E-06 | None | None | None | None | I | None | 1.01588E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.34084E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9844 | likely_pathogenic | 0.9628 | pathogenic | -2.554 | Highly Destabilizing | 0.997 | D | 0.692 | prob.neutral | None | None | None | None | I |
I/C | 0.9812 | likely_pathogenic | 0.9593 | pathogenic | -1.558 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
I/D | 0.9993 | likely_pathogenic | 0.9978 | pathogenic | -2.65 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
I/E | 0.9965 | likely_pathogenic | 0.9917 | pathogenic | -2.547 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
I/F | 0.9605 | likely_pathogenic | 0.9102 | pathogenic | -1.771 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | D | 0.541488989 | None | None | I |
I/G | 0.997 | likely_pathogenic | 0.9902 | pathogenic | -2.993 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
I/H | 0.9984 | likely_pathogenic | 0.9952 | pathogenic | -2.327 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
I/K | 0.995 | likely_pathogenic | 0.9888 | pathogenic | -1.956 | Destabilizing | 0.995 | D | 0.839 | deleterious | None | None | None | None | I |
I/L | 0.5459 | ambiguous | 0.3888 | ambiguous | -1.33 | Destabilizing | 0.388 | N | 0.459 | neutral | N | 0.488808839 | None | None | I |
I/M | 0.6645 | likely_pathogenic | 0.4879 | ambiguous | -0.911 | Destabilizing | 0.995 | D | 0.697 | prob.neutral | D | 0.537440519 | None | None | I |
I/N | 0.9785 | likely_pathogenic | 0.9468 | pathogenic | -1.956 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.545037842 | None | None | I |
I/P | 0.9728 | likely_pathogenic | 0.9251 | pathogenic | -1.715 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
I/Q | 0.9957 | likely_pathogenic | 0.9889 | pathogenic | -2.031 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
I/R | 0.9941 | likely_pathogenic | 0.986 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
I/S | 0.9872 | likely_pathogenic | 0.9676 | pathogenic | -2.584 | Highly Destabilizing | 0.999 | D | 0.805 | deleterious | D | 0.537694008 | None | None | I |
I/T | 0.9674 | likely_pathogenic | 0.9364 | pathogenic | -2.361 | Highly Destabilizing | 0.986 | D | 0.795 | deleterious | N | 0.511195962 | None | None | I |
I/V | 0.1174 | likely_benign | 0.1121 | benign | -1.715 | Destabilizing | 0.05 | N | 0.257 | neutral | N | 0.458686711 | None | None | I |
I/W | 0.999 | likely_pathogenic | 0.9962 | pathogenic | -2.057 | Highly Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
I/Y | 0.9934 | likely_pathogenic | 0.9823 | pathogenic | -1.845 | Destabilizing | 0.997 | D | 0.765 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.