Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24553 | 73882;73883;73884 | chr2:178572475;178572474;178572473 | chr2:179437202;179437201;179437200 |
N2AB | 22912 | 68959;68960;68961 | chr2:178572475;178572474;178572473 | chr2:179437202;179437201;179437200 |
N2A | 21985 | 66178;66179;66180 | chr2:178572475;178572474;178572473 | chr2:179437202;179437201;179437200 |
N2B | 15488 | 46687;46688;46689 | chr2:178572475;178572474;178572473 | chr2:179437202;179437201;179437200 |
Novex-1 | 15613 | 47062;47063;47064 | chr2:178572475;178572474;178572473 | chr2:179437202;179437201;179437200 |
Novex-2 | 15680 | 47263;47264;47265 | chr2:178572475;178572474;178572473 | chr2:179437202;179437201;179437200 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1368527977 | -0.313 | 0.999 | N | 0.525 | 0.354 | 0.209622950755 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7554 | likely_pathogenic | 0.6718 | pathogenic | -0.787 | Destabilizing | 0.991 | D | 0.734 | prob.delet. | None | None | None | None | N |
N/C | 0.5076 | ambiguous | 0.4536 | ambiguous | -0.282 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
N/D | 0.7258 | likely_pathogenic | 0.6221 | pathogenic | -1.836 | Destabilizing | 0.996 | D | 0.493 | neutral | N | 0.476470893 | None | None | N |
N/E | 0.9437 | likely_pathogenic | 0.912 | pathogenic | -1.627 | Destabilizing | 0.998 | D | 0.511 | neutral | None | None | None | None | N |
N/F | 0.881 | likely_pathogenic | 0.8454 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
N/G | 0.528 | ambiguous | 0.4732 | ambiguous | -1.177 | Destabilizing | 1.0 | D | 0.451 | neutral | None | None | None | None | N |
N/H | 0.2169 | likely_benign | 0.1973 | benign | -0.914 | Destabilizing | 0.807 | D | 0.371 | neutral | N | 0.462126874 | None | None | N |
N/I | 0.9194 | likely_pathogenic | 0.8902 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.897 | deleterious | N | 0.492132839 | None | None | N |
N/K | 0.8737 | likely_pathogenic | 0.8498 | pathogenic | -0.382 | Destabilizing | 0.999 | D | 0.525 | neutral | N | 0.519460237 | None | None | N |
N/L | 0.8315 | likely_pathogenic | 0.7777 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
N/M | 0.8427 | likely_pathogenic | 0.7901 | pathogenic | 0.532 | Stabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
N/P | 0.9965 | likely_pathogenic | 0.9955 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
N/Q | 0.8041 | likely_pathogenic | 0.7555 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
N/R | 0.846 | likely_pathogenic | 0.828 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
N/S | 0.2438 | likely_benign | 0.2004 | benign | -1.248 | Destabilizing | 0.996 | D | 0.468 | neutral | N | 0.473669232 | None | None | N |
N/T | 0.6295 | likely_pathogenic | 0.5539 | ambiguous | -0.865 | Destabilizing | 0.997 | D | 0.539 | neutral | N | 0.473584057 | None | None | N |
N/V | 0.8883 | likely_pathogenic | 0.8558 | pathogenic | -0.074 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
N/W | 0.9555 | likely_pathogenic | 0.9431 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
N/Y | 0.3782 | ambiguous | 0.3419 | ambiguous | 0.021 | Stabilizing | 1.0 | D | 0.865 | deleterious | N | 0.472445195 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.