Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24562 | 73909;73910;73911 | chr2:178572448;178572447;178572446 | chr2:179437175;179437174;179437173 |
N2AB | 22921 | 68986;68987;68988 | chr2:178572448;178572447;178572446 | chr2:179437175;179437174;179437173 |
N2A | 21994 | 66205;66206;66207 | chr2:178572448;178572447;178572446 | chr2:179437175;179437174;179437173 |
N2B | 15497 | 46714;46715;46716 | chr2:178572448;178572447;178572446 | chr2:179437175;179437174;179437173 |
Novex-1 | 15622 | 47089;47090;47091 | chr2:178572448;178572447;178572446 | chr2:179437175;179437174;179437173 |
Novex-2 | 15689 | 47290;47291;47292 | chr2:178572448;178572447;178572446 | chr2:179437175;179437174;179437173 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.993 | N | 0.429 | 0.399 | 0.401185642668 | gnomAD-4.0.0 | 1.36961E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.32024E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2316 | likely_benign | 0.19 | benign | -0.166 | Destabilizing | 0.139 | N | 0.441 | neutral | N | 0.481251352 | None | None | N |
T/C | 0.8539 | likely_pathogenic | 0.8148 | pathogenic | -0.37 | Destabilizing | 0.995 | D | 0.473 | neutral | None | None | None | None | N |
T/D | 0.8899 | likely_pathogenic | 0.8499 | pathogenic | 0.026 | Stabilizing | 0.935 | D | 0.459 | neutral | None | None | None | None | N |
T/E | 0.8455 | likely_pathogenic | 0.7967 | pathogenic | -0.067 | Destabilizing | 0.979 | D | 0.459 | neutral | None | None | None | None | N |
T/F | 0.7938 | likely_pathogenic | 0.7314 | pathogenic | -0.828 | Destabilizing | 0.967 | D | 0.505 | neutral | None | None | None | None | N |
T/G | 0.4639 | ambiguous | 0.3818 | ambiguous | -0.219 | Destabilizing | 0.975 | D | 0.441 | neutral | None | None | None | None | N |
T/H | 0.7387 | likely_pathogenic | 0.6588 | pathogenic | -0.354 | Destabilizing | 0.996 | D | 0.541 | neutral | None | None | None | None | N |
T/I | 0.7315 | likely_pathogenic | 0.6802 | pathogenic | -0.148 | Destabilizing | 0.007 | N | 0.347 | neutral | N | 0.49098075 | None | None | N |
T/K | 0.771 | likely_pathogenic | 0.6832 | pathogenic | -0.263 | Destabilizing | 0.943 | D | 0.462 | neutral | N | 0.489081402 | None | None | N |
T/L | 0.3492 | ambiguous | 0.294 | benign | -0.148 | Destabilizing | 0.18 | N | 0.469 | neutral | None | None | None | None | N |
T/M | 0.2925 | likely_benign | 0.2493 | benign | -0.156 | Destabilizing | 0.976 | D | 0.437 | neutral | None | None | None | None | N |
T/N | 0.4199 | ambiguous | 0.3525 | ambiguous | -0.083 | Destabilizing | 0.935 | D | 0.41 | neutral | None | None | None | None | N |
T/P | 0.5984 | likely_pathogenic | 0.4859 | ambiguous | -0.131 | Destabilizing | 0.915 | D | 0.433 | neutral | N | 0.466862561 | None | None | N |
T/Q | 0.6456 | likely_pathogenic | 0.5596 | ambiguous | -0.294 | Destabilizing | 0.969 | D | 0.437 | neutral | None | None | None | None | N |
T/R | 0.7482 | likely_pathogenic | 0.6457 | pathogenic | 0.033 | Stabilizing | 0.993 | D | 0.429 | neutral | N | 0.512342263 | None | None | N |
T/S | 0.2166 | likely_benign | 0.1839 | benign | -0.256 | Destabilizing | 0.247 | N | 0.423 | neutral | N | 0.441250169 | None | None | N |
T/V | 0.5071 | ambiguous | 0.449 | ambiguous | -0.131 | Destabilizing | 0.136 | N | 0.463 | neutral | None | None | None | None | N |
T/W | 0.9575 | likely_pathogenic | 0.9346 | pathogenic | -0.91 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
T/Y | 0.8688 | likely_pathogenic | 0.8148 | pathogenic | -0.588 | Destabilizing | 0.983 | D | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.