Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24570 | 73933;73934;73935 | chr2:178572424;178572423;178572422 | chr2:179437151;179437150;179437149 |
N2AB | 22929 | 69010;69011;69012 | chr2:178572424;178572423;178572422 | chr2:179437151;179437150;179437149 |
N2A | 22002 | 66229;66230;66231 | chr2:178572424;178572423;178572422 | chr2:179437151;179437150;179437149 |
N2B | 15505 | 46738;46739;46740 | chr2:178572424;178572423;178572422 | chr2:179437151;179437150;179437149 |
Novex-1 | 15630 | 47113;47114;47115 | chr2:178572424;178572423;178572422 | chr2:179437151;179437150;179437149 |
Novex-2 | 15697 | 47314;47315;47316 | chr2:178572424;178572423;178572422 | chr2:179437151;179437150;179437149 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.006 | N | 0.433 | 0.083 | 0.212008924253 | gnomAD-4.0.0 | 1.59325E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3053 | likely_benign | 0.2912 | benign | -0.975 | Destabilizing | 0.001 | N | 0.325 | neutral | None | None | None | None | N |
A/D | 0.5611 | ambiguous | 0.4242 | ambiguous | -1.513 | Destabilizing | 0.176 | N | 0.501 | neutral | None | None | None | None | N |
A/E | 0.5002 | ambiguous | 0.3879 | ambiguous | -1.497 | Destabilizing | 0.311 | N | 0.497 | neutral | N | 0.489908121 | None | None | N |
A/F | 0.4065 | ambiguous | 0.302 | benign | -1.104 | Destabilizing | 0.849 | D | 0.532 | neutral | None | None | None | None | N |
A/G | 0.2193 | likely_benign | 0.178 | benign | -1.349 | Destabilizing | 0.006 | N | 0.433 | neutral | N | 0.454584826 | None | None | N |
A/H | 0.5576 | ambiguous | 0.4631 | ambiguous | -1.62 | Destabilizing | 0.919 | D | 0.531 | neutral | None | None | None | None | N |
A/I | 0.2209 | likely_benign | 0.1592 | benign | -0.303 | Destabilizing | 0.444 | N | 0.471 | neutral | None | None | None | None | N |
A/K | 0.7085 | likely_pathogenic | 0.5999 | pathogenic | -1.253 | Destabilizing | 0.615 | D | 0.497 | neutral | None | None | None | None | N |
A/L | 0.1794 | likely_benign | 0.1415 | benign | -0.303 | Destabilizing | 0.102 | N | 0.413 | neutral | None | None | None | None | N |
A/M | 0.1877 | likely_benign | 0.1565 | benign | -0.208 | Destabilizing | 0.248 | N | 0.378 | neutral | None | None | None | None | N |
A/N | 0.2657 | likely_benign | 0.1941 | benign | -1.066 | Destabilizing | None | N | 0.331 | neutral | None | None | None | None | N |
A/P | 0.9286 | likely_pathogenic | 0.8661 | pathogenic | -0.503 | Destabilizing | 0.696 | D | 0.545 | neutral | N | 0.493353858 | None | None | N |
A/Q | 0.4635 | ambiguous | 0.3687 | ambiguous | -1.162 | Destabilizing | 0.919 | D | 0.533 | neutral | None | None | None | None | N |
A/R | 0.6752 | likely_pathogenic | 0.5638 | ambiguous | -0.979 | Destabilizing | 0.849 | D | 0.539 | neutral | None | None | None | None | N |
A/S | 0.0966 | likely_benign | 0.0849 | benign | -1.442 | Destabilizing | 0.005 | N | 0.456 | neutral | N | 0.401097058 | None | None | N |
A/T | 0.0751 | likely_benign | 0.0683 | benign | -1.322 | Destabilizing | 0.001 | N | 0.261 | neutral | N | 0.385551602 | None | None | N |
A/V | 0.1108 | likely_benign | 0.0862 | benign | -0.503 | Destabilizing | 0.006 | N | 0.261 | neutral | N | 0.432822687 | None | None | N |
A/W | 0.8333 | likely_pathogenic | 0.7626 | pathogenic | -1.55 | Destabilizing | 0.992 | D | 0.593 | neutral | None | None | None | None | N |
A/Y | 0.5451 | ambiguous | 0.4651 | ambiguous | -1.103 | Destabilizing | 0.919 | D | 0.535 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.