Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24574 | 73945;73946;73947 | chr2:178572412;178572411;178572410 | chr2:179437139;179437138;179437137 |
N2AB | 22933 | 69022;69023;69024 | chr2:178572412;178572411;178572410 | chr2:179437139;179437138;179437137 |
N2A | 22006 | 66241;66242;66243 | chr2:178572412;178572411;178572410 | chr2:179437139;179437138;179437137 |
N2B | 15509 | 46750;46751;46752 | chr2:178572412;178572411;178572410 | chr2:179437139;179437138;179437137 |
Novex-1 | 15634 | 47125;47126;47127 | chr2:178572412;178572411;178572410 | chr2:179437139;179437138;179437137 |
Novex-2 | 15701 | 47326;47327;47328 | chr2:178572412;178572411;178572410 | chr2:179437139;179437138;179437137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs754917150 | 1.178 | 0.399 | N | 0.377 | 0.217 | 0.368369118721 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2243 | likely_benign | 0.2337 | benign | 0.453 | Stabilizing | 0.478 | N | 0.375 | neutral | None | None | None | None | N |
H/C | 0.141 | likely_benign | 0.1525 | benign | 1.022 | Stabilizing | 0.991 | D | 0.337 | neutral | None | None | None | None | N |
H/D | 0.3933 | ambiguous | 0.3998 | ambiguous | 0.197 | Stabilizing | 0.501 | D | 0.41 | neutral | N | 0.470167567 | None | None | N |
H/E | 0.4204 | ambiguous | 0.4242 | ambiguous | 0.223 | Stabilizing | 0.647 | D | 0.351 | neutral | None | None | None | None | N |
H/F | 0.2423 | likely_benign | 0.2588 | benign | 1.06 | Stabilizing | 0.946 | D | 0.372 | neutral | None | None | None | None | N |
H/G | 0.2348 | likely_benign | 0.2429 | benign | 0.157 | Stabilizing | 0.816 | D | 0.376 | neutral | None | None | None | None | N |
H/I | 0.224 | likely_benign | 0.248 | benign | 1.207 | Stabilizing | 0.861 | D | 0.354 | neutral | None | None | None | None | N |
H/K | 0.333 | likely_benign | 0.3513 | ambiguous | 0.494 | Stabilizing | 0.638 | D | 0.41 | neutral | None | None | None | None | N |
H/L | 0.0957 | likely_benign | 0.1019 | benign | 1.207 | Stabilizing | 0.399 | N | 0.377 | neutral | N | 0.504394784 | None | None | N |
H/M | 0.3254 | likely_benign | 0.3488 | ambiguous | 0.99 | Stabilizing | 0.993 | D | 0.339 | neutral | None | None | None | None | N |
H/N | 0.0858 | likely_benign | 0.0945 | benign | 0.592 | Stabilizing | 0.501 | D | 0.415 | neutral | N | 0.411753981 | None | None | N |
H/P | 0.0966 | likely_benign | 0.1002 | benign | 0.982 | Stabilizing | 0.001 | N | 0.171 | neutral | N | 0.425856642 | None | None | N |
H/Q | 0.1647 | likely_benign | 0.1748 | benign | 0.691 | Stabilizing | 0.908 | D | 0.39 | neutral | N | 0.474477308 | None | None | N |
H/R | 0.1842 | likely_benign | 0.1877 | benign | -0.16 | Destabilizing | 0.823 | D | 0.367 | neutral | N | 0.456080762 | None | None | N |
H/S | 0.1542 | likely_benign | 0.1636 | benign | 0.688 | Stabilizing | 0.689 | D | 0.417 | neutral | None | None | None | None | N |
H/T | 0.1719 | likely_benign | 0.1904 | benign | 0.814 | Stabilizing | 0.004 | N | 0.257 | neutral | None | None | None | None | N |
H/V | 0.1899 | likely_benign | 0.2033 | benign | 0.982 | Stabilizing | 0.479 | N | 0.359 | neutral | None | None | None | None | N |
H/W | 0.4026 | ambiguous | 0.4019 | ambiguous | 1.027 | Stabilizing | 0.998 | D | 0.406 | neutral | None | None | None | None | N |
H/Y | 0.1089 | likely_benign | 0.1189 | benign | 1.353 | Stabilizing | 0.976 | D | 0.396 | neutral | N | 0.470025658 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.