Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24587 | 73984;73985;73986 | chr2:178572373;178572372;178572371 | chr2:179437100;179437099;179437098 |
N2AB | 22946 | 69061;69062;69063 | chr2:178572373;178572372;178572371 | chr2:179437100;179437099;179437098 |
N2A | 22019 | 66280;66281;66282 | chr2:178572373;178572372;178572371 | chr2:179437100;179437099;179437098 |
N2B | 15522 | 46789;46790;46791 | chr2:178572373;178572372;178572371 | chr2:179437100;179437099;179437098 |
Novex-1 | 15647 | 47164;47165;47166 | chr2:178572373;178572372;178572371 | chr2:179437100;179437099;179437098 |
Novex-2 | 15714 | 47365;47366;47367 | chr2:178572373;178572372;178572371 | chr2:179437100;179437099;179437098 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/F | rs1326848733 | None | 0.964 | N | 0.471 | 0.266 | 0.706567288939 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
C/F | rs1326848733 | None | 0.964 | N | 0.471 | 0.266 | 0.706567288939 | gnomAD-4.0.0 | 6.57307E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47059E-05 | 0 | 0 |
C/R | rs776113871 | -0.324 | 0.656 | N | 0.373 | 0.216 | 0.53911333632 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 1.16077E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
C/R | rs776113871 | -0.324 | 0.656 | N | 0.373 | 0.216 | 0.53911333632 | gnomAD-4.0.0 | 4.1073E-06 | None | None | None | None | N | None | 0 | 8.94935E-05 | None | 0 | 0 | None | 0 | 0 | 8.99871E-07 | 0 | 1.65733E-05 |
C/S | rs776113871 | -0.914 | 0.001 | N | 0.149 | 0.149 | 0.515259903717 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
C/S | rs776113871 | -0.914 | 0.001 | N | 0.149 | 0.149 | 0.515259903717 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
C/S | rs776113871 | -0.914 | 0.001 | N | 0.149 | 0.149 | 0.515259903717 | gnomAD-4.0.0 | 6.57289E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47046E-05 | 0 | 0 |
C/Y | rs1326848733 | None | 0.988 | N | 0.468 | 0.274 | 0.714984421374 | gnomAD-4.0.0 | 6.84571E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52729E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4114 | ambiguous | 0.336 | benign | -1.702 | Destabilizing | 0.008 | N | 0.065 | neutral | None | None | None | None | N |
C/D | 0.8874 | likely_pathogenic | 0.7933 | pathogenic | -0.032 | Destabilizing | 0.239 | N | 0.382 | neutral | None | None | None | None | N |
C/E | 0.9294 | likely_pathogenic | 0.868 | pathogenic | 0.037 | Stabilizing | 0.281 | N | 0.324 | neutral | None | None | None | None | N |
C/F | 0.3254 | likely_benign | 0.2337 | benign | -1.168 | Destabilizing | 0.964 | D | 0.471 | neutral | N | 0.472000668 | None | None | N |
C/G | 0.2261 | likely_benign | 0.1697 | benign | -1.975 | Destabilizing | 0.137 | N | 0.315 | neutral | N | 0.448869575 | None | None | N |
C/H | 0.6997 | likely_pathogenic | 0.5621 | ambiguous | -1.87 | Destabilizing | 0.931 | D | 0.473 | neutral | None | None | None | None | N |
C/I | 0.609 | likely_pathogenic | 0.4962 | ambiguous | -1.015 | Destabilizing | 0.835 | D | 0.45 | neutral | None | None | None | None | N |
C/K | 0.9325 | likely_pathogenic | 0.8634 | pathogenic | -0.754 | Destabilizing | 0.028 | N | 0.152 | neutral | None | None | None | None | N |
C/L | 0.5889 | likely_pathogenic | 0.4675 | ambiguous | -1.015 | Destabilizing | 0.676 | D | 0.337 | neutral | None | None | None | None | N |
C/M | 0.6416 | likely_pathogenic | 0.5543 | ambiguous | -0.219 | Destabilizing | 0.991 | D | 0.429 | neutral | None | None | None | None | N |
C/N | 0.5075 | ambiguous | 0.3797 | ambiguous | -0.634 | Destabilizing | 0.018 | N | 0.209 | neutral | None | None | None | None | N |
C/P | 0.9908 | likely_pathogenic | 0.9853 | pathogenic | -1.218 | Destabilizing | 0.56 | D | 0.491 | neutral | None | None | None | None | N |
C/Q | 0.7634 | likely_pathogenic | 0.6386 | pathogenic | -0.614 | Destabilizing | 0.654 | D | 0.491 | neutral | None | None | None | None | N |
C/R | 0.7755 | likely_pathogenic | 0.636 | pathogenic | -0.526 | Destabilizing | 0.656 | D | 0.373 | neutral | N | 0.429646309 | None | None | N |
C/S | 0.2745 | likely_benign | 0.2025 | benign | -1.225 | Destabilizing | 0.001 | N | 0.149 | neutral | N | 0.41490893 | None | None | N |
C/T | 0.4878 | ambiguous | 0.387 | ambiguous | -0.977 | Destabilizing | 0.218 | N | 0.335 | neutral | None | None | None | None | N |
C/V | 0.4964 | ambiguous | 0.411 | ambiguous | -1.218 | Destabilizing | 0.438 | N | 0.324 | neutral | None | None | None | None | N |
C/W | 0.7761 | likely_pathogenic | 0.6586 | pathogenic | -1.075 | Destabilizing | 0.997 | D | 0.437 | neutral | N | 0.472254157 | None | None | N |
C/Y | 0.5216 | ambiguous | 0.3806 | ambiguous | -1.082 | Destabilizing | 0.988 | D | 0.468 | neutral | N | 0.517190723 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.