Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24593 | 74002;74003;74004 | chr2:178572355;178572354;178572353 | chr2:179437082;179437081;179437080 |
N2AB | 22952 | 69079;69080;69081 | chr2:178572355;178572354;178572353 | chr2:179437082;179437081;179437080 |
N2A | 22025 | 66298;66299;66300 | chr2:178572355;178572354;178572353 | chr2:179437082;179437081;179437080 |
N2B | 15528 | 46807;46808;46809 | chr2:178572355;178572354;178572353 | chr2:179437082;179437081;179437080 |
Novex-1 | 15653 | 47182;47183;47184 | chr2:178572355;178572354;178572353 | chr2:179437082;179437081;179437080 |
Novex-2 | 15720 | 47383;47384;47385 | chr2:178572355;178572354;178572353 | chr2:179437082;179437081;179437080 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.29 | N | 0.189 | 0.35 | 0.581280949539 | gnomAD-4.0.0 | 1.59448E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9613 | likely_pathogenic | 0.9206 | pathogenic | -2.741 | Highly Destabilizing | 0.987 | D | 0.547 | neutral | D | 0.566304509 | None | None | N |
V/C | 0.9765 | likely_pathogenic | 0.9625 | pathogenic | -2.185 | Highly Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/D | 0.9996 | likely_pathogenic | 0.9992 | pathogenic | -3.777 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.659897235 | None | None | N |
V/E | 0.9985 | likely_pathogenic | 0.9974 | pathogenic | -3.475 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/F | 0.9665 | likely_pathogenic | 0.9254 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | D | 0.589181704 | None | None | N |
V/G | 0.9804 | likely_pathogenic | 0.9611 | pathogenic | -3.299 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.659897235 | None | None | N |
V/H | 0.9996 | likely_pathogenic | 0.9991 | pathogenic | -3.051 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/I | 0.1168 | likely_benign | 0.0993 | benign | -1.094 | Destabilizing | 0.29 | N | 0.189 | neutral | N | 0.496411341 | None | None | N |
V/K | 0.9989 | likely_pathogenic | 0.9981 | pathogenic | -2.471 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/L | 0.8094 | likely_pathogenic | 0.7014 | pathogenic | -1.094 | Destabilizing | 0.853 | D | 0.245 | neutral | D | 0.528673513 | None | None | N |
V/M | 0.9213 | likely_pathogenic | 0.8372 | pathogenic | -1.284 | Destabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | N |
V/N | 0.9977 | likely_pathogenic | 0.9958 | pathogenic | -3.139 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/P | 0.9983 | likely_pathogenic | 0.997 | pathogenic | -1.629 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/Q | 0.9984 | likely_pathogenic | 0.9968 | pathogenic | -2.831 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/R | 0.9975 | likely_pathogenic | 0.9958 | pathogenic | -2.379 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/S | 0.9904 | likely_pathogenic | 0.9803 | pathogenic | -3.611 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
V/T | 0.9722 | likely_pathogenic | 0.9543 | pathogenic | -3.169 | Highly Destabilizing | 1.0 | D | 0.569 | neutral | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9992 | pathogenic | -2.195 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/Y | 0.9977 | likely_pathogenic | 0.9948 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.