Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2460 | 7603;7604;7605 | chr2:178773678;178773677;178773676 | chr2:179638405;179638404;179638403 |
N2AB | 2460 | 7603;7604;7605 | chr2:178773678;178773677;178773676 | chr2:179638405;179638404;179638403 |
N2A | 2460 | 7603;7604;7605 | chr2:178773678;178773677;178773676 | chr2:179638405;179638404;179638403 |
N2B | 2414 | 7465;7466;7467 | chr2:178773678;178773677;178773676 | chr2:179638405;179638404;179638403 |
Novex-1 | 2414 | 7465;7466;7467 | chr2:178773678;178773677;178773676 | chr2:179638405;179638404;179638403 |
Novex-2 | 2414 | 7465;7466;7467 | chr2:178773678;178773677;178773676 | chr2:179638405;179638404;179638403 |
Novex-3 | 2460 | 7603;7604;7605 | chr2:178773678;178773677;178773676 | chr2:179638405;179638404;179638403 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.919 | N | 0.42 | 0.199 | 0.195762928549 | gnomAD-4.0.0 | 1.59071E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85673E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1571 | likely_benign | 0.1548 | benign | -0.733 | Destabilizing | 0.919 | D | 0.42 | neutral | N | 0.448707792 | None | None | N |
T/C | 0.653 | likely_pathogenic | 0.6484 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
T/D | 0.5868 | likely_pathogenic | 0.5873 | pathogenic | 0.315 | Stabilizing | 0.995 | D | 0.589 | neutral | None | None | None | None | N |
T/E | 0.4204 | ambiguous | 0.4211 | ambiguous | 0.273 | Stabilizing | 0.991 | D | 0.594 | neutral | None | None | None | None | N |
T/F | 0.5974 | likely_pathogenic | 0.5827 | pathogenic | -1.012 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/G | 0.3675 | ambiguous | 0.3688 | ambiguous | -0.92 | Destabilizing | 0.991 | D | 0.601 | neutral | None | None | None | None | N |
T/H | 0.4991 | ambiguous | 0.5022 | ambiguous | -1.216 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
T/I | 0.5272 | ambiguous | 0.5077 | ambiguous | -0.344 | Destabilizing | 0.994 | D | 0.643 | neutral | N | 0.512221962 | None | None | N |
T/K | 0.2736 | likely_benign | 0.2681 | benign | -0.472 | Destabilizing | 0.991 | D | 0.593 | neutral | None | None | None | None | N |
T/L | 0.2652 | likely_benign | 0.2531 | benign | -0.344 | Destabilizing | 0.968 | D | 0.522 | neutral | None | None | None | None | N |
T/M | 0.1512 | likely_benign | 0.1506 | benign | -0.045 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
T/N | 0.1935 | likely_benign | 0.1909 | benign | -0.291 | Destabilizing | 0.994 | D | 0.659 | neutral | N | 0.443763509 | None | None | N |
T/P | 0.7064 | likely_pathogenic | 0.7112 | pathogenic | -0.444 | Destabilizing | 0.067 | N | 0.331 | neutral | D | 0.550308438 | None | None | N |
T/Q | 0.294 | likely_benign | 0.2969 | benign | -0.524 | Destabilizing | 0.995 | D | 0.669 | neutral | None | None | None | None | N |
T/R | 0.2393 | likely_benign | 0.2375 | benign | -0.24 | Destabilizing | 0.995 | D | 0.643 | neutral | None | None | None | None | N |
T/S | 0.1636 | likely_benign | 0.1629 | benign | -0.632 | Destabilizing | 0.958 | D | 0.423 | neutral | N | 0.44029738 | None | None | N |
T/V | 0.3688 | ambiguous | 0.3502 | ambiguous | -0.444 | Destabilizing | 0.984 | D | 0.494 | neutral | None | None | None | None | N |
T/W | 0.8555 | likely_pathogenic | 0.8565 | pathogenic | -0.908 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/Y | 0.6153 | likely_pathogenic | 0.6113 | pathogenic | -0.674 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.