Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24604 | 74035;74036;74037 | chr2:178572322;178572321;178572320 | chr2:179437049;179437048;179437047 |
N2AB | 22963 | 69112;69113;69114 | chr2:178572322;178572321;178572320 | chr2:179437049;179437048;179437047 |
N2A | 22036 | 66331;66332;66333 | chr2:178572322;178572321;178572320 | chr2:179437049;179437048;179437047 |
N2B | 15539 | 46840;46841;46842 | chr2:178572322;178572321;178572320 | chr2:179437049;179437048;179437047 |
Novex-1 | 15664 | 47215;47216;47217 | chr2:178572322;178572321;178572320 | chr2:179437049;179437048;179437047 |
Novex-2 | 15731 | 47416;47417;47418 | chr2:178572322;178572321;178572320 | chr2:179437049;179437048;179437047 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.988 | N | 0.697 | 0.427 | 0.340510301474 | gnomAD-4.0.0 | 3.19777E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.75649E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2333 | likely_benign | 0.1444 | benign | -1.423 | Destabilizing | 0.874 | D | 0.587 | neutral | N | 0.477734659 | None | None | I |
P/C | 0.8476 | likely_pathogenic | 0.736 | pathogenic | -0.833 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | I |
P/D | 0.9815 | likely_pathogenic | 0.9568 | pathogenic | -1.278 | Destabilizing | 0.94 | D | 0.759 | deleterious | None | None | None | None | I |
P/E | 0.934 | likely_pathogenic | 0.8714 | pathogenic | -1.295 | Destabilizing | 0.961 | D | 0.743 | deleterious | None | None | None | None | I |
P/F | 0.896 | likely_pathogenic | 0.783 | pathogenic | -1.099 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
P/G | 0.7274 | likely_pathogenic | 0.5314 | ambiguous | -1.715 | Destabilizing | 0.994 | D | 0.717 | prob.delet. | None | None | None | None | I |
P/H | 0.7894 | likely_pathogenic | 0.6452 | pathogenic | -1.215 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.528328122 | None | None | I |
P/I | 0.9194 | likely_pathogenic | 0.8368 | pathogenic | -0.729 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | I |
P/K | 0.9612 | likely_pathogenic | 0.9156 | pathogenic | -1.252 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | I |
P/L | 0.6379 | likely_pathogenic | 0.4657 | ambiguous | -0.729 | Destabilizing | 0.997 | D | 0.778 | deleterious | D | 0.522425866 | None | None | I |
P/M | 0.8462 | likely_pathogenic | 0.7387 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
P/N | 0.9484 | likely_pathogenic | 0.8939 | pathogenic | -0.98 | Destabilizing | 0.99 | D | 0.787 | deleterious | None | None | None | None | I |
P/Q | 0.7939 | likely_pathogenic | 0.6695 | pathogenic | -1.18 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | I |
P/R | 0.907 | likely_pathogenic | 0.8182 | pathogenic | -0.665 | Destabilizing | 0.998 | D | 0.806 | deleterious | D | 0.550191359 | None | None | I |
P/S | 0.5425 | ambiguous | 0.3701 | ambiguous | -1.446 | Destabilizing | 0.988 | D | 0.697 | prob.neutral | N | 0.502688996 | None | None | I |
P/T | 0.6533 | likely_pathogenic | 0.475 | ambiguous | -1.364 | Destabilizing | 0.133 | N | 0.429 | neutral | D | 0.532340594 | None | None | I |
P/V | 0.8043 | likely_pathogenic | 0.6577 | pathogenic | -0.926 | Destabilizing | 0.986 | D | 0.71 | prob.delet. | None | None | None | None | I |
P/W | 0.96 | likely_pathogenic | 0.8935 | pathogenic | -1.269 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
P/Y | 0.9136 | likely_pathogenic | 0.8081 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.