Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24606 | 74041;74042;74043 | chr2:178572316;178572315;178572314 | chr2:179437043;179437042;179437041 |
N2AB | 22965 | 69118;69119;69120 | chr2:178572316;178572315;178572314 | chr2:179437043;179437042;179437041 |
N2A | 22038 | 66337;66338;66339 | chr2:178572316;178572315;178572314 | chr2:179437043;179437042;179437041 |
N2B | 15541 | 46846;46847;46848 | chr2:178572316;178572315;178572314 | chr2:179437043;179437042;179437041 |
Novex-1 | 15666 | 47221;47222;47223 | chr2:178572316;178572315;178572314 | chr2:179437043;179437042;179437041 |
Novex-2 | 15733 | 47422;47423;47424 | chr2:178572316;178572315;178572314 | chr2:179437043;179437042;179437041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1466808448 | -0.563 | 0.976 | N | 0.629 | 0.249 | 0.279370189704 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.50195E-04 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1466808448 | -0.563 | 0.976 | N | 0.629 | 0.249 | 0.279370189704 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93498E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1466808448 | -0.563 | 0.976 | N | 0.629 | 0.249 | 0.279370189704 | gnomAD-4.0.0 | 6.57255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93498E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3683 | ambiguous | 0.2267 | benign | -0.683 | Destabilizing | 0.968 | D | 0.619 | neutral | N | 0.479910252 | None | None | N |
E/C | 0.93 | likely_pathogenic | 0.8705 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/D | 0.3031 | likely_benign | 0.1874 | benign | -0.993 | Destabilizing | 0.888 | D | 0.605 | neutral | N | 0.520574957 | None | None | N |
E/F | 0.9093 | likely_pathogenic | 0.8007 | pathogenic | 0.132 | Stabilizing | 1.0 | D | 0.732 | deleterious | None | None | None | None | N |
E/G | 0.5387 | ambiguous | 0.3217 | benign | -1.068 | Destabilizing | 0.999 | D | 0.582 | neutral | N | 0.498320903 | None | None | N |
E/H | 0.7974 | likely_pathogenic | 0.6195 | pathogenic | -0.022 | Destabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | N |
E/I | 0.572 | likely_pathogenic | 0.3999 | ambiguous | 0.374 | Stabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
E/K | 0.4778 | ambiguous | 0.2773 | benign | -0.485 | Destabilizing | 0.429 | N | 0.369 | neutral | N | 0.470808899 | None | None | N |
E/L | 0.6845 | likely_pathogenic | 0.5056 | ambiguous | 0.374 | Stabilizing | 0.996 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/M | 0.6651 | likely_pathogenic | 0.5104 | ambiguous | 0.673 | Stabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
E/N | 0.6086 | likely_pathogenic | 0.3989 | ambiguous | -1.089 | Destabilizing | 0.991 | D | 0.617 | neutral | None | None | None | None | N |
E/P | 0.9019 | likely_pathogenic | 0.7739 | pathogenic | 0.043 | Stabilizing | 0.991 | D | 0.735 | deleterious | None | None | None | None | N |
E/Q | 0.3037 | likely_benign | 0.2043 | benign | -0.917 | Destabilizing | 0.976 | D | 0.629 | neutral | N | 0.480697174 | None | None | N |
E/R | 0.6694 | likely_pathogenic | 0.4654 | ambiguous | -0.106 | Destabilizing | 0.992 | D | 0.648 | neutral | None | None | None | None | N |
E/S | 0.4535 | ambiguous | 0.2832 | benign | -1.384 | Destabilizing | 0.976 | D | 0.633 | neutral | None | None | None | None | N |
E/T | 0.4387 | ambiguous | 0.2778 | benign | -1.057 | Destabilizing | 0.997 | D | 0.663 | prob.neutral | None | None | None | None | N |
E/V | 0.36 | ambiguous | 0.2436 | benign | 0.043 | Stabilizing | 0.993 | D | 0.706 | prob.delet. | N | 0.478886748 | None | None | N |
E/W | 0.9816 | likely_pathogenic | 0.9496 | pathogenic | 0.436 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/Y | 0.8895 | likely_pathogenic | 0.7537 | pathogenic | 0.403 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.