Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24609 | 74050;74051;74052 | chr2:178572307;178572306;178572305 | chr2:179437034;179437033;179437032 |
N2AB | 22968 | 69127;69128;69129 | chr2:178572307;178572306;178572305 | chr2:179437034;179437033;179437032 |
N2A | 22041 | 66346;66347;66348 | chr2:178572307;178572306;178572305 | chr2:179437034;179437033;179437032 |
N2B | 15544 | 46855;46856;46857 | chr2:178572307;178572306;178572305 | chr2:179437034;179437033;179437032 |
Novex-1 | 15669 | 47230;47231;47232 | chr2:178572307;178572306;178572305 | chr2:179437034;179437033;179437032 |
Novex-2 | 15736 | 47431;47432;47433 | chr2:178572307;178572306;178572305 | chr2:179437034;179437033;179437032 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs754097967 | 0.024 | None | N | 0.22 | 0.064 | 0.185906805712 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
E/D | rs754097967 | 0.024 | None | N | 0.22 | 0.064 | 0.185906805712 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93573E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs754097967 | 0.024 | None | N | 0.22 | 0.064 | 0.185906805712 | gnomAD-4.0.0 | 6.57376E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93573E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs55762754 | 0.693 | 0.519 | N | 0.605 | 0.234 | 0.327686398923 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 8.92E-06 | 0 |
E/K | rs55762754 | 0.693 | 0.519 | N | 0.605 | 0.234 | 0.327686398923 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93573E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs55762754 | 0.693 | 0.519 | N | 0.605 | 0.234 | 0.327686398923 | gnomAD-4.0.0 | 1.86143E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23684E-05 | None | 0 | 0 | 1.69765E-06 | 0 | 0 |
E/Q | rs55762754 | 0.351 | 0.846 | N | 0.66 | 0.209 | None | gnomAD-2.1.1 | 3.33679E-03 | None | None | None | None | N | None | 3.30743E-04 | 1.21924E-03 | None | 5.81734E-04 | 0 | None | 2.61746E-04 | None | 1.30187E-02 | 3.99837E-03 | 4.50958E-03 |
E/Q | rs55762754 | 0.351 | 0.846 | N | 0.66 | 0.209 | None | gnomAD-3.1.2 | 3.02413E-03 | None | None | None | None | N | None | 5.30837E-04 | 7.8637E-04 | 1.09649E-03 | 8.64553E-04 | 0 | None | 1.23329E-02 | 0 | 4.13223E-03 | 8.285E-04 | 2.87081E-03 |
E/Q | rs55762754 | 0.351 | 0.846 | N | 0.66 | 0.209 | None | 1000 genomes | 1.59744E-03 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 8E-03 | None | None | None | 0 | None |
E/Q | rs55762754 | 0.351 | 0.846 | N | 0.66 | 0.209 | None | gnomAD-4.0.0 | 2.94478E-03 | None | None | None | None | N | None | 4.13355E-04 | 1.11756E-03 | None | 6.08643E-04 | 0 | None | 1.32229E-02 | 8.27267E-04 | 3.02862E-03 | 3.95491E-04 | 2.78945E-03 |
E/V | None | None | 0.718 | N | 0.725 | 0.384 | 0.344017737713 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1624 | likely_benign | 0.141 | benign | -0.095 | Destabilizing | 0.368 | N | 0.635 | neutral | N | 0.48019974 | None | None | N |
E/C | 0.7983 | likely_pathogenic | 0.772 | pathogenic | -0.334 | Destabilizing | 0.984 | D | 0.727 | deleterious | None | None | None | None | N |
E/D | 0.0732 | likely_benign | 0.0758 | benign | -0.309 | Destabilizing | None | N | 0.22 | neutral | N | 0.452541811 | None | None | N |
E/F | 0.7001 | likely_pathogenic | 0.6446 | pathogenic | -0.04 | Destabilizing | 0.992 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/G | 0.1816 | likely_benign | 0.1554 | benign | -0.218 | Destabilizing | 0.66 | D | 0.538 | neutral | N | 0.462210844 | None | None | N |
E/H | 0.4962 | ambiguous | 0.447 | ambiguous | 0.622 | Stabilizing | 0.988 | D | 0.651 | prob.neutral | None | None | None | None | N |
E/I | 0.3306 | likely_benign | 0.295 | benign | 0.177 | Stabilizing | 0.826 | D | 0.741 | deleterious | None | None | None | None | N |
E/K | 0.2636 | likely_benign | 0.2144 | benign | 0.343 | Stabilizing | 0.519 | D | 0.605 | neutral | N | 0.474528201 | None | None | N |
E/L | 0.4042 | ambiguous | 0.3632 | ambiguous | 0.177 | Stabilizing | 0.826 | D | 0.74 | deleterious | None | None | None | None | N |
E/M | 0.4822 | ambiguous | 0.4272 | ambiguous | -0.09 | Destabilizing | 0.907 | D | 0.728 | deleterious | None | None | None | None | N |
E/N | 0.1895 | likely_benign | 0.1802 | benign | 0.002 | Stabilizing | 0.353 | N | 0.649 | prob.neutral | None | None | None | None | N |
E/P | 0.7668 | likely_pathogenic | 0.6944 | pathogenic | 0.104 | Stabilizing | 0.414 | N | 0.717 | prob.delet. | None | None | None | None | N |
E/Q | 0.1874 | likely_benign | 0.1664 | benign | 0.031 | Stabilizing | 0.846 | D | 0.66 | prob.neutral | N | 0.468705304 | None | None | N |
E/R | 0.4237 | ambiguous | 0.3588 | ambiguous | 0.638 | Stabilizing | 0.91 | D | 0.692 | prob.delet. | None | None | None | None | N |
E/S | 0.1747 | likely_benign | 0.1575 | benign | -0.126 | Destabilizing | 0.435 | N | 0.585 | neutral | None | None | None | None | N |
E/T | 0.1981 | likely_benign | 0.1714 | benign | -0.012 | Destabilizing | 0.789 | D | 0.661 | prob.neutral | None | None | None | None | N |
E/V | 0.2062 | likely_benign | 0.1776 | benign | 0.104 | Stabilizing | 0.718 | D | 0.725 | deleterious | N | 0.490795577 | None | None | N |
E/W | 0.9132 | likely_pathogenic | 0.8841 | pathogenic | 0.04 | Stabilizing | 0.997 | D | 0.707 | prob.delet. | None | None | None | None | N |
E/Y | 0.5891 | likely_pathogenic | 0.5361 | ambiguous | 0.186 | Stabilizing | 0.997 | D | 0.703 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.